Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS19560 and ABID97_RS19565 are separated by 31 nucleotidesABID97_RS19565 and ABID97_RS19570 are separated by 25 nucleotidesABID97_RS19570 and ABID97_RS19575 are separated by 115 nucleotidesABID97_RS19575 and ABID97_RS19580 are separated by 122 nucleotides ABID97_RS19560: ABID97_RS19560 - HAMP domain-containing sensor histidine kinase, at 4,037,963 to 4,039,321 _RS19560 ABID97_RS19565: ABID97_RS19565 - thioesterase family protein, at 4,039,353 to 4,039,775 _RS19565 ABID97_RS19570: ABID97_RS19570 - SDR family oxidoreductase, at 4,039,801 to 4,040,583 _RS19570 ABID97_RS19575: ABID97_RS19575 - electron transfer flavoprotein-ubiquinone oxidoreductase, at 4,040,699 to 4,042,396 _RS19575 ABID97_RS19580: ABID97_RS19580 - hydantoinase B/oxoprolinase family protein, at 4,042,519 to 4,046,166 _RS19580
Group Condition ABID97_RS19560 ABID97_RS19565 ABID97_RS19570 ABID97_RS19575 ABID97_RS19580
carbon source L-Glutamine (C) -0.9 -0.1 -0.2 N.D. -0.3
carbon source L-Glutamine (C) -0.6 +0.0 -0.4 N.D. -0.5
carbon source D-Mannose (C) -1.2 -0.1 +0.0 N.D. -0.1
carbon source L-Arabinose (C) -0.6 -0.4 -0.1 N.D. -0.1
carbon source Gly-Glu (C) +0.2 -0.1 -0.3 N.D. -1.0
carbon source L-Fucose (C) -1.2 +0.0 +0.2 N.D. -0.2
carbon source casaminos (C) -0.6 -0.2 -0.0 N.D. -0.4
carbon source Gly-Glu (C) -0.0 -0.1 -0.0 N.D. -0.9
carbon source Glucuronamide (C) -0.7 -0.2 -0.1 N.D. +0.1
carbon source L-Alanine (C) -0.3 +0.5 -0.4 N.D. -0.4
carbon source L-Histidine (C) +0.5 +0.0 -0.2 N.D. -0.5
carbon source L-Lactate (C) +0.5 -0.3 -0.1 N.D. -0.2
carbon source D,L-Malic Acid (C) +0.4 -0.1 +0.1 N.D. -0.4
carbon source L-Glutamic (C) +0.8 -0.3 -0.2 N.D. -0.3
carbon source Glycolic Acid (C) +0.5 -0.4 +0.2 N.D. -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 -0.6 +0.8 N.D. -0.7
carbon source L-Asparagine (C) +0.9 -0.5 -0.2 N.D. -0.1
r2a outgrowth control R2A outgrowth control +0.6 -0.2 +0.2 N.D. -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.3 +0.6 N.D. -0.2
carbon source 2-Deoxy-D-Ribose (C) +0.6 -0.4 +0.1 N.D. +0.2
carbon source D-Sorbitol (C) +0.9 -0.1 -0.0 N.D. -0.1
carbon source a-Ketoglutaric (C) +1.0 -0.2 -0.0 N.D. -0.1
phage V2_10 +0.8 -0.1 -0.2 N.D. +0.3
carbon source Tween 20 (C) +0.9 +0.3 -0.2 N.D. -0.2
carbon source L-tyrosine (C) +0.6 +0.7 -0.4 N.D. -0.0
plant outgrowth control Plant outgrowth control +1.2 -0.0 +0.1 N.D. -0.3
carbon source D-Mannose (C) +1.1 -0.0 -0.0 N.D. +0.1
phage V2_100 +1.2 -0.3 -0.1 N.D. +0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +0.4 +0.4 N.D. +0.1
phage V2_10 +0.7 +0.4 +0.1 N.D. +0.4
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