Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS19445 and ABID97_RS19450 are separated by 23 nucleotidesABID97_RS19450 and ABID97_RS19455 are separated by 46 nucleotidesABID97_RS19455 and ABID97_RS19460 overlap by 4 nucleotidesABID97_RS19460 and ABID97_RS19465 overlap by 4 nucleotides ABID97_RS19445: ABID97_RS19445 - LuxR C-terminal-related transcriptional regulator, at 4,014,996 to 4,015,562 _RS19445 ABID97_RS19450: ABID97_RS19450 - tripartite tricarboxylate transporter substrate binding protein, at 4,015,586 to 4,016,563 _RS19450 ABID97_RS19455: ABID97_RS19455 - VOC family protein, at 4,016,610 to 4,016,990 _RS19455 ABID97_RS19460: ABID97_RS19460 - hydroxymethylglutaryl-CoA lyase, at 4,016,987 to 4,017,970 _RS19460 ABID97_RS19465: ABID97_RS19465 - CoA transferase, at 4,017,967 to 4,019,142 _RS19465
Group Condition ABID97_RS19445 ABID97_RS19450 ABID97_RS19455 ABID97_RS19460 ABID97_RS19465
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.4 -0.8 -0.5 -0.4
carbon source L-tyrosine (C) N.D. -0.6 -0.5 +0.4 -1.0
carbon source propionate (C) N.D. -0.8 +0.1 -0.2 -0.9
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.5 -0.5 -0.1 -0.5
carbon source D,L-Malic Acid (C) N.D. -0.2 -0.9 +0.2 -0.5
carbon source D-Sorbitol (C) N.D. -0.3 -0.3 -0.1 -0.5
phage V2_1 N.D. -0.3 -0.2 -0.6 -0.1
carbon source D-Glucose (C) N.D. -0.2 -0.8 -0.1 -0.1
carbon source L-Alanine (C) N.D. +0.4 +0.1 -0.0 -1.6
carbon source L-Histidine (C) N.D. -0.0 -0.1 +0.4 -1.3
carbon source Tween 20 (C) N.D. -0.0 -0.2 +0.1 -0.8
carbon source D-Xylose (C) N.D. +0.2 -0.5 +0.1 -0.6
phage V1_10 N.D. -0.5 -0.7 -0.0 +0.5
phage V1_1 N.D. -0.2 -0.8 -0.3 +0.6
carbon source casaminos (C) N.D. +0.1 -0.1 +0.2 -0.8
carbon source Glycolic Acid (C) N.D. +0.2 -0.9 +0.0 +0.2
phage V2_100 N.D. -0.2 -0.9 +0.2 +0.6
carbon source D-Glucuronic Acid (C) N.D. +0.1 -0.5 +0.3 -0.2
carbon source D-Sorbitol (C) N.D. +0.3 -0.2 +0.2 -0.4
carbon source D,L-Lactate (C) N.D. +0.3 +0.3 +0.3 -0.8
carbon source D-Mannose (C) N.D. -0.1 +0.6 +0.0 -0.4
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.6 +0.6 +0.6 -0.3
phage V1_1 N.D. -0.1 -0.3 +0.4 +0.5
carbon source pyruvate (C) N.D. -0.4 +0.4 -0.0 +0.5
carbon source Ethanol (C) N.D. +0.4 -0.3 +0.6 -0.1
carbon source propionate (C) N.D. -0.4 +0.8 +0.3 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.2 -0.1 +0.3 +0.8
carbon source Ethanol (C) N.D. +0.2 +0.3 -0.1 +0.6
carbon source butyrate (C) N.D. -0.1 +0.5 +0.5 +0.5
carbon source butyrate (C) N.D. -0.0 +0.4 +1.0 +0.2
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ABID97_RS19445
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ABID97_RS19450
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ABID97_RS19460
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ABID97_RS19465
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