Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS19440 and ABID97_RS19445 are separated by 105 nucleotidesABID97_RS19445 and ABID97_RS19450 are separated by 23 nucleotidesABID97_RS19450 and ABID97_RS19455 are separated by 46 nucleotidesABID97_RS19455 and ABID97_RS19460 overlap by 4 nucleotides ABID97_RS19440: ABID97_RS19440 - CoA transferase subunit A, at 4,014,087 to 4,014,890 _RS19440 ABID97_RS19445: ABID97_RS19445 - LuxR C-terminal-related transcriptional regulator, at 4,014,996 to 4,015,562 _RS19445 ABID97_RS19450: ABID97_RS19450 - tripartite tricarboxylate transporter substrate binding protein, at 4,015,586 to 4,016,563 _RS19450 ABID97_RS19455: ABID97_RS19455 - VOC family protein, at 4,016,610 to 4,016,990 _RS19455 ABID97_RS19460: ABID97_RS19460 - hydroxymethylglutaryl-CoA lyase, at 4,016,987 to 4,017,970 _RS19460
Group Condition ABID97_RS19440 ABID97_RS19445 ABID97_RS19450 ABID97_RS19455 ABID97_RS19460
carbon source L-Phenylalanine (C) -4.9 N.D. -0.0 -0.3 +0.1
carbon source L-Phenylalanine (C) -2.4 N.D. -0.2 -0.1 -0.6
carbon source L-Leucine (C) -2.8 N.D. +0.1 -0.1 +0.2
carbon source 4-Hydroxybenzoic Acid (C) -1.4 N.D. -0.5 -0.5 -0.1
carbon source D-Glucose (C) -0.9 N.D. -0.2 -0.8 -0.1
carbon source 2-Deoxy-D-Ribose (C) -2.1 N.D. -0.0 -0.1 +0.2
carbon source 2-Deoxy-D-Ribose (C) -1.5 N.D. +0.0 -0.4 -0.0
carbon source L-tyrosine (C) -1.2 N.D. +0.1 -0.5 -0.1
carbon source D-Lactate (C) -1.0 N.D. -0.4 -0.1 -0.0
carbon source L-Leucine (C) -1.5 N.D. +0.1 -0.3 +0.2
phage V1_10 -0.3 N.D. -0.5 -0.7 -0.0
carbon source D-Glucose (C) -1.1 N.D. +0.3 -0.5 -0.0
phage V1_1 +0.1 N.D. -0.2 -0.8 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 N.D. -0.4 -0.8 -0.5
carbon source D,L-Malic Acid (C) +0.1 N.D. -0.2 -0.9 +0.2
phage V2_100 +0.1 N.D. -0.2 -0.9 +0.2
carbon source Tween 20 (C) -0.7 N.D. +0.3 -0.3 -0.1
carbon source D-Gluconic Acid (C) -0.8 N.D. -0.0 -0.1 +0.4
carbon source D-Glucuronic Acid (C) -0.5 N.D. +0.1 -0.5 +0.3
carbon source D-Serine (C) -0.6 N.D. +0.4 -0.5 +0.2
carbon source Gly-Glu (C) +0.4 N.D. -0.1 -0.4 -0.3
carbon source D,L-Malic Acid (C) +0.3 N.D. -0.3 -0.6 +0.1
carbon source Glycolic Acid (C) +0.3 N.D. +0.2 -0.9 +0.0
carbon source propionate (C) -1.0 N.D. -0.4 +0.8 +0.3
carbon source L-tyrosine (C) +0.6 N.D. -0.6 -0.5 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 N.D. +0.0 +0.4 +0.2
carbon source 4-Hydroxybenzoic Acid (C) -0.1 N.D. -0.6 +0.6 +0.6
carbon source Ethanol (C) -0.1 N.D. +0.4 -0.3 +0.6
carbon source butyrate (C) +3.0 N.D. -0.0 +0.4 +1.0
carbon source butyrate (C) +3.6 N.D. -0.1 +0.5 +0.5
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ABID97_RS19440
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ABID97_RS19445
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