Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS19355 and ABID97_RS19360 are separated by 43 nucleotidesABID97_RS19360 and ABID97_RS19365 are separated by 214 nucleotidesABID97_RS19365 and ABID97_RS19370 are separated by 175 nucleotidesABID97_RS19370 and ABID97_RS19375 are separated by 4 nucleotides ABID97_RS19355: ABID97_RS19355 - cupin domain-containing protein, at 3,996,282 to 3,996,752 _RS19355 ABID97_RS19360: ABID97_RS19360 - DUF4242 domain-containing protein, at 3,996,796 to 3,997,071 _RS19360 ABID97_RS19365: ABID97_RS19365 - alpha/beta hydrolase, at 3,997,286 to 3,997,627 _RS19365 ABID97_RS19370: ABID97_RS19370 - isocitrate lyase/PEP mutase family protein, at 3,997,803 to 3,998,681 _RS19370 ABID97_RS19375: ABID97_RS19375 - bifunctional 2-methylcitrate dehydratase/aconitate hydratase, at 3,998,686 to 4,000,143 _RS19375
Group Condition ABID97_RS19355 ABID97_RS19360 ABID97_RS19365 ABID97_RS19370 ABID97_RS19375
carbon source D-Lactate (C) N.D. -0.6 -0.8 -0.7 -2.7
carbon source Gly-Glu (C) N.D. -0.7 -0.6 -1.3 -1.9
carbon source L-Lactate (C) N.D. -0.4 -0.8 -0.3 -2.3
carbon source propionate (C) N.D. +0.4 -0.2 -2.0 -2.0
carbon source propionate (C) N.D. +0.1 -0.1 -1.4 -2.4
carbon source D-Glucose (C) N.D. -0.5 -0.6 -0.5 -1.9
carbon source L-Phenylalanine (C) N.D. -0.6 -0.7 -0.9 -1.1
carbon source succinate (C) N.D. -0.2 -0.8 -0.5 -1.6
carbon source pyruvate (C) N.D. -0.4 -0.4 -0.2 -2.1
carbon source Glycerol (C) N.D. -0.5 -0.4 -0.7 -1.5
carbon source Fumarate (C) N.D. -0.4 -0.3 -0.6 -1.5
carbon source L-Threonine (C) N.D. +0.4 +0.1 -0.6 -2.8
carbon source L-Tryptophan (C) N.D. -0.7 -0.6 -0.4 -1.2
carbon source L-Leucine (C) N.D. -0.4 -0.3 -0.1 -2.1
carbon source Fumarate (C) N.D. -0.0 -0.3 -0.4 -2.1
carbon source D-Fructose (C) N.D. -0.2 -0.5 -0.3 -1.7
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.9 -0.7 -0.6 -0.4
carbon source Glycerol (C) N.D. -0.3 +0.1 -0.0 -2.4
carbon source L-Threonine (C) N.D. +0.1 +0.2 -0.3 -2.5
carbon source L-Malic (C) N.D. -0.1 -0.4 -0.3 -1.6
carbon source casaminos (C) N.D. -0.2 +0.0 -0.4 -1.9
carbon source succinate (C) N.D. -0.3 -0.1 -0.0 -2.0
carbon source L-tyrosine (C) N.D. -0.3 -0.0 -0.2 -1.7
carbon source D-Sorbitol (C) N.D. -0.3 -0.2 +0.1 -1.8
carbon source D,L-Malic Acid (C) N.D. +0.2 -0.5 -0.4 -1.3
carbon source L-Histidine (C) N.D. -0.1 -0.2 +0.2 -1.8
carbon source D-Xylose (C) N.D. +0.1 +0.2 +0.0 -2.2
carbon source Adenine (C) N.D. +0.3 -0.1 +0.1 -1.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.2 +0.5 -0.1 -1.7
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.3 +0.3 +0.8 +2.2
remove
ABID97_RS19355
plot		 remove
ABID97_RS19360
plot		 remove
ABID97_RS19365		 remove
ABID97_RS19370
plot		 remove
ABID97_RS19375
plot