Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS19235 and ABID97_RS19240 are separated by 116 nucleotidesABID97_RS19240 and ABID97_RS19245 are separated by 170 nucleotidesABID97_RS19245 and ABID97_RS19250 are separated by 17 nucleotidesABID97_RS19250 and ABID97_RS19255 are separated by 92 nucleotides ABID97_RS19235: ABID97_RS19235 - LysR substrate-binding domain-containing protein, at 3,970,194 to 3,971,123 _RS19235 ABID97_RS19240: ABID97_RS19240 - ABC transporter substrate-binding protein, at 3,971,240 to 3,972,364 _RS19240 ABID97_RS19245: ABID97_RS19245 - aldo/keto reductase, at 3,972,535 to 3,973,371 _RS19245 ABID97_RS19250: ABID97_RS19250 - alpha/beta fold hydrolase, at 3,973,389 to 3,974,264 _RS19250 ABID97_RS19255: ABID97_RS19255 - class III extradiol ring-cleavage dioxygenase, at 3,974,357 to 3,975,175 _RS19255
Group Condition ABID97_RS19235 ABID97_RS19240 ABID97_RS19245 ABID97_RS19250 ABID97_RS19255
carbon source L-Glutamine (C) -0.6 -0.0 -0.1 N.D. -0.4
carbon source L-Alanine (C) -0.6 -0.4 +0.1 N.D. +0.0
carbon source D,L-Malic Acid (C) -0.4 +0.1 -0.2 N.D. -0.2
carbon source 4-Hydroxybenzoic Acid (C) -0.9 +0.3 -0.1 N.D. +0.0
carbon source D-Glucose (C) -0.4 +0.2 -0.1 N.D. -0.3
plant outgrowth control Plant outgrowth control -0.3 +0.1 -0.6 N.D. +0.1
carbon source L-Malic (C) -0.1 +0.2 -0.3 N.D. -0.3
carbon source Adenine (C) -0.3 +0.3 -0.4 N.D. -0.0
carbon source D-Arabinose (C) -0.6 +0.1 +0.2 N.D. -0.2
carbon source L-Proline (C) -0.5 +0.1 +0.2 N.D. -0.3
carbon source D-Gluconic Acid (C) -0.8 +0.3 +0.1 N.D. +0.1
carbon source butyrate (C) -0.2 +0.2 -0.3 N.D. -0.1
carbon source Tween 20 (C) -0.5 +0.1 -0.1 N.D. +0.3
carbon source L-Histidine (C) -0.2 +0.3 +0.2 N.D. -0.3
carbon source Formate (C) -0.6 +0.2 +0.3 N.D. +0.0
carbon source D,L-Malic Acid (C) -0.6 +0.1 +0.4 N.D. +0.1
carbon source Tween 20 (C) -0.3 +0.4 -0.2 N.D. +0.1
carbon source D-Xylose (C) -0.4 +0.4 +0.0 N.D. -0.1
carbon source L-Tryptophan (C) -0.4 +0.5 -0.0 N.D. +0.0
carbon source D-Gluconic Acid (C) -0.2 +0.3 +0.2 N.D. -0.2
carbon source D-Galactose (C) -0.3 +0.3 +0.3 N.D. -0.2
carbon source a-Ketoglutaric (C) +0.4 +0.2 -0.1 N.D. -0.2
carbon source L-Phenylalanine (C) -0.1 +0.3 +0.3 N.D. -0.2
carbon source Ethanol (C) -0.1 +0.3 +0.5 N.D. -0.2
phage V2_100 +0.8 +0.0 -0.5 N.D. +0.3
carbon source D,L-Lactate (C) +0.2 +0.5 +0.2 N.D. +0.1
carbon source L-Tryptophan (C) +0.2 +0.4 +0.2 N.D. +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.1 +1.1 N.D. +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.1 +0.7 N.D. +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.6 -0.1 +0.1 N.D. -0.0
remove
ABID97_RS19235
plot		 remove
ABID97_RS19240
plot		 remove
ABID97_RS19245		 remove
ABID97_RS19250
plot		 remove
ABID97_RS19255
plot