Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS18955 and ABID97_RS18960 overlap by 4 nucleotidesABID97_RS18960 and ABID97_RS18965 are separated by 207 nucleotidesABID97_RS18965 and ABID97_RS18970 are separated by 253 nucleotidesABID97_RS18970 and ABID97_RS18975 are separated by 48 nucleotides ABID97_RS18955: ABID97_RS18955 - branched-chain amino acid ABC transporter permease, at 3,903,693 to 3,904,724 _RS18955 ABID97_RS18960: ABID97_RS18960 - branched-chain amino acid ABC transporter permease, at 3,904,721 to 3,905,614 _RS18960 ABID97_RS18965: ABID97_RS18965 - nuclear transport factor 2 family protein, at 3,905,822 to 3,906,271 _RS18965 ABID97_RS18970: ABID97_RS18970 - cytochrome P450, at 3,906,525 to 3,907,511 _RS18970 ABID97_RS18975: ABID97_RS18975 - ABC transporter substrate-binding protein, at 3,907,560 to 3,908,693 _RS18975
Group Condition ABID97_RS18955 ABID97_RS18960 ABID97_RS18965 ABID97_RS18970 ABID97_RS18975
carbon source L-tyrosine (C) -1.1 -0.2 -0.7 +0.1 -0.7
carbon source D,L-Malic Acid (C) -1.2 -0.3 -0.1 -0.3 -0.4
carbon source L-Arabinose (C) -0.9 -0.0 -0.3 -0.1 -0.2
carbon source L-Fucose (C) -0.4 -0.1 -0.4 -0.3 -0.4
carbon source D,L-Lactate (C) -0.5 +0.3 -0.4 -0.2 -0.3
carbon source D,L-Malic Acid (C) -0.1 +0.3 -0.4 -0.7 +0.2
carbon source D-Ribose (C) -0.7 -0.0 -0.0 -0.3 +0.5
carbon source Formate (C) -0.5 +0.2 -0.2 -0.3 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 +0.4 -0.2 -0.3 -0.0
carbon source a-Ketoglutaric (C) +0.2 +0.6 -0.4 -0.8 -0.1
carbon source L-Glutamic (C) +0.2 -0.5 -0.4 +0.3 +0.0
r2a outgrowth control R2A outgrowth control -0.4 +0.1 -0.2 +0.6 -0.3
carbon source Glycerol (C) +0.7 -0.4 -0.1 -0.2 +0.1
carbon source L-Alanine (C) +1.1 -0.2 -0.0 -0.4 -0.5
control NP -0.6 +0.3 +0.3 -0.1 +0.2
carbon source L-Leucine (C) +0.8 -0.3 -0.2 -0.1 +0.0
phage V1_1 -0.5 +0.2 -0.1 +0.6 +0.1
carbon source L-Asparagine (C) +0.7 -0.2 -0.5 +0.2 +0.2
carbon source 2-Deoxy-D-Ribose (C) +0.5 -0.2 -0.3 +0.2 +0.3
phage V1_10 -0.4 +0.0 +0.8 +0.3 -0.1
carbon source Tween 20 (C) +0.9 -0.0 -0.3 +0.4 -0.4
carbon source L-Lactate (C) +0.5 +0.2 -0.4 +0.0 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 -0.4 -0.1 +0.9 +0.3
carbon source D-Glucuronic Acid (C) +0.5 +0.4 -0.3 -0.1 +0.1
phage V1_10 -0.3 +0.2 +0.1 +0.8 -0.1
carbon source butyrate (C) +0.7 -0.3 +0.1 +0.3 +0.0
carbon source acetate (C) +0.8 +0.0 -0.0 -0.3 +0.3
phage V2_100 +0.9 -1.0 +0.2 +1.1 -0.0
carbon source D-Sorbitol (C) +0.9 +0.2 +0.1 +0.4 -0.4
carbon source D-Arabinose (C) +1.0 +0.0 +0.3 +0.2 +0.3
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ABID97_RS18955
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ABID97_RS18960
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ABID97_RS18970
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ABID97_RS18975
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