Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS18925 and ABID97_RS18930 are separated by 116 nucleotidesABID97_RS18930 and ABID97_RS18935 are separated by 207 nucleotidesABID97_RS18935 and ABID97_RS18940 are separated by 115 nucleotidesABID97_RS18940 and ABID97_RS18945 are separated by 91 nucleotides ABID97_RS18925: ABID97_RS18925 - IclR family transcriptional regulator, at 3,898,022 to 3,898,852 _RS18925 ABID97_RS18930: ABID97_RS18930 - helix-turn-helix transcriptional regulator, at 3,898,969 to 3,899,820 _RS18930 ABID97_RS18935: ABID97_RS18935 - hypothetical protein, at 3,900,028 to 3,900,615 _RS18935 ABID97_RS18940: ABID97_RS18940 - Crp/Fnr family transcriptional regulator, at 3,900,731 to 3,901,483 _RS18940 ABID97_RS18945: ABID97_RS18945 - ABC transporter ATP-binding protein, at 3,901,575 to 3,902,294 _RS18945
Group Condition ABID97_RS18925 ABID97_RS18930 ABID97_RS18935 ABID97_RS18940 ABID97_RS18945
carbon source propionate (C) -2.2 +0.2 -0.1 -1.3 +0.1
carbon source butyrate (C) -0.0 -0.1 -0.6 -0.8 -0.3
phage V2_100 -0.2 +0.1 -0.8 -0.8 -0.2
carbon source Glucuronamide (C) -0.5 -0.6 -0.4 +0.5 -0.4
carbon source L-Asparagine (C) -0.4 +0.0 -0.4 +0.3 -0.3
carbon source L-Alanine (C) +0.6 -0.0 +0.1 -0.5 -0.4
carbon source L-Histidine (C) -0.3 -0.3 -0.1 +0.7 -0.2
carbon source L-Glutamine (C) -0.4 +0.1 -0.2 +0.6 -0.2
carbon source butyrate (C) +0.3 -0.3 -0.1 +0.6 -0.5
carbon source L-tyrosine (C) +0.8 -0.4 -0.8 +0.6 -0.1
carbon source D-Gluconic Acid (C) +0.5 +0.2 +0.1 -0.1 -0.6
carbon source D,L-Lactate (C) -0.3 -0.1 +0.2 +0.7 -0.3
carbon source Glucuronamide (C) -0.5 +0.0 -0.3 +0.7 +0.3
carbon source D,L-Malic Acid (C) +0.2 -0.3 -0.6 +0.8 +0.2
carbon source casaminos (C) -0.3 -0.2 -0.3 +0.6 +0.4
carbon source Tween 20 (C) +0.4 +0.0 -0.2 +0.4 -0.4
phage V2_10 +0.4 -0.0 -0.6 +0.4 +0.2
carbon source 2-Deoxy-D-Ribose (C) -0.1 +0.0 +0.3 -0.6 +1.0
r2a outgrowth control R2A outgrowth control +0.8 -0.1 -0.4 +0.3 +0.1
carbon source D-Arabinose (C) -0.4 -0.1 +0.1 +1.0 +0.1
carbon source L-Lactate (C) +0.1 +0.2 -0.3 +0.8 -0.1
r2a outgrowth control R2A outgrowth control +0.0 -0.2 -0.1 +0.8 +0.2
carbon source L-tyrosine (C) -0.2 +0.2 -0.4 +0.3 +0.9
phage V1_10 +0.2 +0.2 -0.4 +0.7 +0.1
carbon source D-Glucose (C) -0.1 +0.3 -0.2 +0.6 +0.2
carbon source L-Phenylalanine (C) -0.2 +0.1 +0.3 +1.0 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 -0.1 +0.4 -0.1 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 +0.0 -0.1 +0.1 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 -0.3 +0.7 -0.1 +0.5
carbon source D,L-Malic Acid (C) +0.0 +0.2 -0.3 +1.0 +0.6
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