Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS18905 and ABID97_RS18910 are separated by 17 nucleotidesABID97_RS18910 and ABID97_RS18915 are separated by 87 nucleotidesABID97_RS18915 and ABID97_RS18920 are separated by 4 nucleotidesABID97_RS18920 and ABID97_RS18925 are separated by 21 nucleotides ABID97_RS18905: ABID97_RS18905 - NAD(P)H-binding protein, at 3,894,989 to 3,895,636 _RS18905 ABID97_RS18910: ABID97_RS18910 - NIPSNAP family protein, at 3,895,654 to 3,896,355 _RS18910 ABID97_RS18915: ABID97_RS18915 - zinc-binding dehydrogenase, at 3,896,443 to 3,897,393 _RS18915 ABID97_RS18920: ABID97_RS18920 - NAD(P)H:quinone oxidoreductase, at 3,897,398 to 3,898,000 _RS18920 ABID97_RS18925: ABID97_RS18925 - IclR family transcriptional regulator, at 3,898,022 to 3,898,852 _RS18925
Group Condition ABID97_RS18905 ABID97_RS18910 ABID97_RS18915 ABID97_RS18920 ABID97_RS18925
carbon source propionate (C) N.D. N.D. -0.0 +0.5 -2.2
carbon source a-Ketoglutaric (C) N.D. N.D. -0.2 -0.8 -0.1
carbon source Glucuronamide (C) N.D. N.D. +0.1 -0.7 -0.5
carbon source D,L-Lactate (C) N.D. N.D. -0.6 -0.2 -0.3
carbon source D-Arabinose (C) N.D. N.D. -0.4 -0.2 -0.4
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. +0.0 -0.6 -0.5
carbon source L-Glutamine (C) N.D. N.D. -0.3 -0.2 -0.4
carbon source L-Phenylalanine (C) N.D. N.D. -0.2 -0.5 -0.2
carbon source D-Fructose (C) N.D. N.D. -0.3 -0.6 -0.0
carbon source L-Glutamic (C) N.D. N.D. -0.1 -0.5 -0.3
carbon source Ethanol (C) N.D. N.D. -0.3 -0.4 -0.2
carbon source Formate (C) N.D. N.D. -0.6 -0.2 -0.0
phage V2_1 N.D. N.D. -0.2 -0.4 -0.2
carbon source acetate (C) N.D. N.D. +0.2 -0.2 -0.6
phage V1_10 N.D. N.D. -0.6 -0.1 +0.2
carbon source Formate (C) N.D. N.D. +0.3 -0.3 -0.3
carbon source D-Gluconic Acid (C) N.D. N.D. -0.2 -0.6 +0.5
carbon source L-Alanine (C) N.D. N.D. -0.1 -0.6 +0.6
carbon source Tween 20 (C) N.D. N.D. -0.0 -0.5 +0.4
carbon source Adenine (C) N.D. N.D. -0.4 +0.5 -0.1
phage V2_10 N.D. N.D. -0.2 +0.5 -0.2
carbon source L-tyrosine (C) N.D. N.D. -0.3 -0.3 +0.8
phage V2_10 N.D. N.D. +0.1 -0.3 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.1 -0.3 +0.5
phage V1_1 N.D. N.D. -0.3 +0.4 +0.2
phage V2_1 N.D. N.D. -0.5 +0.4 +0.3
carbon source D-Glucuronic Acid (C) N.D. N.D. +0.3 +0.7 -0.2
r2a outgrowth control R2A outgrowth control N.D. N.D. +0.3 +0.1 +0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.5 +0.3 +0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.0 +0.8 +0.8
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