Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS18875 and ABID97_RS18880 are separated by 43 nucleotidesABID97_RS18880 and ABID97_RS18885 are separated by 41 nucleotidesABID97_RS18885 and ABID97_RS18890 are separated by 230 nucleotidesABID97_RS18890 and ABID97_RS18895 are separated by 193 nucleotides ABID97_RS18875: ABID97_RS18875 - branched-chain amino acid ABC transporter permease, at 3,887,141 to 3,887,983 _RS18875 ABID97_RS18880: ABID97_RS18880 - ABC transporter substrate-binding protein, at 3,888,027 to 3,889,229 _RS18880 ABID97_RS18885: ABID97_RS18885 - aldehyde dehydrogenase family protein, at 3,889,271 to 3,890,764 _RS18885 ABID97_RS18890: ABID97_RS18890 - LysR family transcriptional regulator, at 3,890,995 to 3,892,230 _RS18890 ABID97_RS18895: ABID97_RS18895 - tannase/feruloyl esterase family alpha/beta hydrolase, at 3,892,424 to 3,894,040 _RS18895
Group Condition ABID97_RS18875 ABID97_RS18880 ABID97_RS18885 ABID97_RS18890 ABID97_RS18895
carbon source Glucuronamide (C) -0.2 -0.3 -0.7 N.D. -0.1
carbon source butyrate (C) -1.1 +0.0 +0.4 N.D. -0.3
carbon source L-Tryptophan (C) -0.2 +0.1 -0.5 N.D. -0.3
carbon source L-Leucine (C) -0.4 +0.0 -0.3 N.D. -0.1
carbon source Formate (C) -0.3 +0.1 -0.5 N.D. -0.0
carbon source D,L-Malic Acid (C) -0.7 +0.4 -0.1 N.D. -0.2
carbon source 2-Deoxy-D-Ribose (C) +0.2 -0.2 -0.5 N.D. -0.1
carbon source D-Arabinose (C) +0.2 -0.1 -0.2 N.D. -0.4
carbon source Formate (C) -0.0 +0.2 -0.2 N.D. -0.4
carbon source a-Ketoglutaric (C) -0.1 +0.2 -0.2 N.D. -0.3
carbon source L-Histidine (C) -0.1 +0.2 -0.4 N.D. -0.1
carbon source D-Serine (C) -0.4 +0.2 -0.3 N.D. +0.1
phage V1_1 -0.4 +0.0 -0.2 N.D. +0.2
carbon source D-Fructose (C) +0.2 +0.0 -0.6 N.D. -0.0
carbon source Ethanol (C) -0.2 +0.3 -0.5 N.D. +0.0
carbon source Adenine (C) -0.5 -0.2 +0.1 N.D. +0.2
phage V2_1 -0.4 -0.1 -0.1 N.D. +0.3
carbon source D-Gluconic Acid (C) +0.4 -0.1 -0.3 N.D. -0.3
phage V2_10 -0.6 +0.2 +0.0 N.D. +0.2
carbon source D-Gluconic Acid (C) -0.4 -0.1 +0.3 N.D. +0.1
carbon source L-tyrosine (C) +0.4 +0.5 -0.2 N.D. -0.9
phage V2_1 -0.2 +0.0 -0.2 N.D. +0.4
carbon source butyrate (C) +0.4 -0.2 -0.2 N.D. +0.1
carbon source D-Glucose (C) +0.5 -0.3 +0.1 N.D. -0.2
plant outgrowth control Plant outgrowth control +0.5 -0.1 -0.1 N.D. +0.1
carbon source Gly-Glu (C) +0.4 +0.0 -0.3 N.D. +0.2
phage V2_100 -0.1 -0.2 +0.2 N.D. +0.4
carbon source L-Histidine (C) +0.2 -0.0 -0.3 N.D. +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 -0.5 +0.4 N.D. +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +0.1 +0.2 N.D. +0.1
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ABID97_RS18875
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ABID97_RS18880
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ABID97_RS18890
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ABID97_RS18895
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