Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS18630 and ABID97_RS18635 overlap by 4 nucleotidesABID97_RS18635 and ABID97_RS18640 are separated by 51 nucleotidesABID97_RS18640 and ABID97_RS18645 are separated by 2 nucleotidesABID97_RS18645 and ABID97_RS18650 are separated by 162 nucleotides ABID97_RS18630: ABID97_RS18630 - SDR family oxidoreductase, at 3,840,846 to 3,841,574 _RS18630 ABID97_RS18635: ABID97_RS18635 - enoyl-CoA hydratase-related protein, at 3,841,571 to 3,842,410 _RS18635 ABID97_RS18640: ABID97_RS18640 - aromatic-ring-hydroxylating dioxygenase subunit beta, at 3,842,462 to 3,842,947 _RS18640 ABID97_RS18645: ABID97_RS18645 - aromatic ring-hydroxylating dioxygenase subunit alpha, at 3,842,950 to 3,844,239 _RS18645 ABID97_RS18650: ABID97_RS18650 - 2Fe-2S iron-sulfur cluster-binding protein, at 3,844,402 to 3,844,722 _RS18650
Group Condition ABID97_RS18630 ABID97_RS18635 ABID97_RS18640 ABID97_RS18645 ABID97_RS18650
carbon source D-Glucose (C) -2.0 +0.4 N.D. -0.5 N.D.
carbon source L-Asparagine (C) -0.5 -1.1 N.D. -0.3 N.D.
carbon source Tween 20 (C) -0.9 -0.6 N.D. -0.3 N.D.
carbon source L-Proline (C) -1.0 -0.4 N.D. -0.4 N.D.
carbon source Adenine (C) -0.5 -1.1 N.D. -0.2 N.D.
carbon source Formate (C) -0.6 -1.0 N.D. -0.0 N.D.
carbon source propionate (C) -1.1 -0.0 N.D. -0.4 N.D.
phage V2_10 -0.8 +0.1 N.D. -0.7 N.D.
carbon source D,L-Malic Acid (C) +0.0 -0.8 N.D. -0.5 N.D.
phage V1_10 +0.0 -0.8 N.D. -0.4 N.D.
carbon source L-Glutamine (C) -0.5 -0.8 N.D. +0.1 N.D.
carbon source L-Threonine (C) -0.4 -0.8 N.D. +0.1 N.D.
carbon source L-Histidine (C) -1.0 +0.1 N.D. +0.1 N.D.
carbon source casaminos (C) -0.9 +0.4 N.D. -0.3 N.D.
phage V2_10 +0.3 -1.0 N.D. -0.0 N.D.
carbon source acetate (C) -0.8 +0.4 N.D. -0.4 N.D.
carbon source L-Fucose (C) +0.3 -1.2 N.D. +0.3 N.D.
carbon source L-Histidine (C) +0.6 -1.1 N.D. -0.0 N.D.
carbon source D-Ribose (C) -0.4 +0.4 N.D. -0.5 N.D.
carbon source D-Gluconic Acid (C) -0.4 +0.5 N.D. -0.3 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.7 +0.6 N.D. -0.0 N.D.
carbon source D-Fructose (C) -0.5 +0.8 N.D. -0.4 N.D.
carbon source D-Mannose (C) -0.6 +0.6 N.D. +0.1 N.D.
carbon source butyrate (C) +0.8 -0.2 N.D. +0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 +1.9 N.D. -0.2 N.D.
r2a outgrowth control R2A outgrowth control +0.2 +1.3 N.D. -0.4 N.D.
r2a outgrowth control R2A outgrowth control +0.7 +1.2 N.D. -0.6 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.5 N.D. +0.4 N.D.
carbon source butyrate (C) +0.6 +0.6 N.D. +0.2 N.D.
plant outgrowth control Plant outgrowth control +0.5 +1.3 N.D. +0.3 N.D.
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ABID97_RS18630
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ABID97_RS18635
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