Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS18585 and ABID97_RS18590 are separated by 59 nucleotidesABID97_RS18590 and ABID97_RS18595 are separated by 97 nucleotidesABID97_RS18595 and ABID97_RS18600 are separated by 2 nucleotidesABID97_RS18600 and ABID97_RS18605 overlap by 4 nucleotides ABID97_RS18585: ABID97_RS18585 - acyl-CoA dehydrogenase family protein, at 3,829,368 to 3,831,023 _RS18585 ABID97_RS18590: ABID97_RS18590 - NAD(P)/FAD-dependent oxidoreductase, at 3,831,083 to 3,832,396 _RS18590 ABID97_RS18595: ABID97_RS18595 - 3-hydroxyacyl-CoA dehydrogenase, at 3,832,494 to 3,834,008 _RS18595 ABID97_RS18600: ABID97_RS18600 - enoyl-CoA hydratase-related protein, at 3,834,011 to 3,834,802 _RS18600 ABID97_RS18605: ABID97_RS18605 - enoyl-CoA hydratase-related protein, at 3,834,799 to 3,835,539 _RS18605
Group Condition ABID97_RS18585 ABID97_RS18590 ABID97_RS18595 ABID97_RS18600 ABID97_RS18605
control NP -1.0 -0.3 N.D. -1.4 N.D.
phage V1_10 -0.3 -0.2 N.D. -2.2 N.D.
phage V2_1 -1.3 -0.2 N.D. -0.8 N.D.
carbon source Formate (C) -1.1 +0.1 N.D. -0.9 N.D.
carbon source D,L-Lactate (C) -0.4 -0.3 N.D. -0.8 N.D.
phage V2_10 -0.3 -0.4 N.D. -0.8 N.D.
carbon source L-Alanine (C) -1.3 -0.6 N.D. +0.8 N.D.
carbon source D-Fructose (C) -1.2 -0.2 N.D. +0.5 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 +0.4 N.D. -0.6 N.D.
carbon source L-Arabinose (C) -0.6 -0.5 N.D. +0.4 N.D.
carbon source Glycolic Acid (C) -0.4 +0.3 N.D. -0.6 N.D.
carbon source L-Alanine (C) -1.3 +0.3 N.D. +0.3 N.D.
carbon source D-Galactose (C) -0.4 -0.7 N.D. +0.4 N.D.
carbon source 2-Deoxy-D-Ribose (C) -1.1 -0.0 N.D. +0.5 N.D.
carbon source D-Gluconic Acid (C) -0.3 -0.7 N.D. +0.4 N.D.
carbon source L-Glutamine (C) -0.8 -0.1 N.D. +0.5 N.D.
carbon source succinate (C) -0.9 +0.2 N.D. +0.5 N.D.
carbon source L-Arabinose (C) -1.1 +0.4 N.D. +0.5 N.D.
r2a outgrowth control R2A outgrowth control +0.6 +0.1 N.D. -0.8 N.D.
r2a outgrowth control R2A outgrowth control +0.9 +0.3 N.D. -1.0 N.D.
carbon source casaminos (C) -0.1 -0.5 N.D. +0.7 N.D.
carbon source L-tyrosine (C) +0.3 -1.2 N.D. +1.1 N.D.
carbon source Formate (C) +0.8 +0.3 N.D. -0.9 N.D.
carbon source Glucuronamide (C) -0.5 -0.1 N.D. +0.9 N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.0 -0.5 N.D. +0.9 N.D.
carbon source L-tyrosine (C) -0.0 -0.3 N.D. +1.0 N.D.
carbon source L-Glutamic (C) +0.7 -0.2 N.D. +0.5 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.2 +0.2 N.D. -0.3 N.D.
carbon source D,L-Malic Acid (C) +1.1 -0.2 N.D. +0.3 N.D.
carbon source L-Phenylalanine (C) +0.8 +0.2 N.D. +0.4 N.D.
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