Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS18575 and ABID97_RS18580 are separated by 34 nucleotidesABID97_RS18580 and ABID97_RS18585 are separated by 11 nucleotidesABID97_RS18585 and ABID97_RS18590 are separated by 59 nucleotidesABID97_RS18590 and ABID97_RS18595 are separated by 97 nucleotides ABID97_RS18575: ABID97_RS18575 - CoA transferase, at 3,828,141 to 3,828,584 _RS18575 ABID97_RS18580: ABID97_RS18580 - CoA transferase, at 3,828,619 to 3,829,356 _RS18580 ABID97_RS18585: ABID97_RS18585 - acyl-CoA dehydrogenase family protein, at 3,829,368 to 3,831,023 _RS18585 ABID97_RS18590: ABID97_RS18590 - NAD(P)/FAD-dependent oxidoreductase, at 3,831,083 to 3,832,396 _RS18590 ABID97_RS18595: ABID97_RS18595 - 3-hydroxyacyl-CoA dehydrogenase, at 3,832,494 to 3,834,008 _RS18595
Group Condition ABID97_RS18575 ABID97_RS18580 ABID97_RS18585 ABID97_RS18590 ABID97_RS18595
carbon source D-Ribose (C) N.D. -2.0 -0.0 -0.6 N.D.
carbon source L-Alanine (C) N.D. -0.3 -1.3 -0.6 N.D.
carbon source D-Arabinose (C) N.D. -1.8 +0.0 -0.2 N.D.
carbon source L-Glutamine (C) N.D. -1.1 -0.8 -0.1 N.D.
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.7 -1.1 -0.0 N.D.
carbon source D-Fructose (C) N.D. -0.2 -1.2 -0.2 N.D.
carbon source L-Arabinose (C) N.D. -0.9 -1.1 +0.4 N.D.
carbon source L-Fucose (C) N.D. -1.7 -0.2 +0.4 N.D.
carbon source D-Sorbitol (C) N.D. -1.0 -0.1 -0.3 N.D.
carbon source L-Leucine (C) N.D. -0.4 -0.6 -0.5 N.D.
carbon source L-Fucose (C) N.D. -2.0 +0.8 -0.2 N.D.
phage V2_1 N.D. +0.1 -1.3 -0.2 N.D.
carbon source D-Sorbitol (C) N.D. -1.4 +0.3 -0.2 N.D.
carbon source L-Alanine (C) N.D. -0.3 -1.3 +0.3 N.D.
carbon source L-tyrosine (C) N.D. -0.3 +0.3 -1.2 N.D.
carbon source L-Tryptophan (C) N.D. -0.9 +0.2 -0.4 N.D.
control NP N.D. +0.1 -1.0 -0.3 N.D.
carbon source D-Gluconic Acid (C) N.D. -0.8 +0.3 -0.6 N.D.
carbon source succinate (C) N.D. -0.4 -0.9 +0.2 N.D.
carbon source D-Serine (C) N.D. -1.2 +0.6 -0.2 N.D.
carbon source Tween 20 (C) N.D. -1.7 +1.0 -0.0 N.D.
phage V2_10 N.D. -1.0 +0.2 +0.2 N.D.
carbon source Glucuronamide (C) N.D. -0.9 +0.5 -0.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -1.9 +1.2 +0.2 N.D.
carbon source Formate (C) N.D. -1.5 +0.8 +0.3 N.D.
carbon source pyruvate (C) N.D. -0.8 +0.4 +0.1 N.D.
carbon source D-Mannose (C) N.D. -0.8 +0.6 +0.1 N.D.
carbon source D,L-Malic Acid (C) N.D. -0.4 +1.1 -0.2 N.D.
r2a outgrowth control R2A outgrowth control N.D. +0.3 +0.9 +0.3 N.D.
r2a outgrowth control R2A outgrowth control N.D. +0.7 +0.6 +0.1 N.D.
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