Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS18510 and ABID97_RS18515 are separated by 142 nucleotidesABID97_RS18515 and ABID97_RS18520 are separated by 37 nucleotidesABID97_RS18520 and ABID97_RS18525 are separated by 66 nucleotidesABID97_RS18525 and ABID97_RS18530 overlap by 1 nucleotides ABID97_RS18510: ABID97_RS18510 - acyl-CoA dehydrogenase family protein, at 3,814,726 to 3,815,889 _RS18510 ABID97_RS18515: ABID97_RS18515 - TetR/AcrR family transcriptional regulator, at 3,816,032 to 3,816,625 _RS18515 ABID97_RS18520: ABID97_RS18520 - ABC transporter substrate-binding protein, at 3,816,663 to 3,817,808 _RS18520 ABID97_RS18525: ABID97_RS18525 - branched-chain amino acid ABC transporter permease, at 3,817,875 to 3,818,921 _RS18525 ABID97_RS18530: ABID97_RS18530 - branched-chain amino acid ABC transporter permease, at 3,818,921 to 3,819,793 _RS18530
Group Condition ABID97_RS18510 ABID97_RS18515 ABID97_RS18520 ABID97_RS18525 ABID97_RS18530
carbon source L-Alanine (C) -0.5 -1.1 -0.0 -0.2 -0.3
carbon source D-Arabinose (C) -0.6 -0.8 -0.4 +0.1 -0.1
carbon source L-Lactate (C) -0.5 -0.7 +0.0 -0.2 -0.4
carbon source D,L-Lactate (C) -0.3 -0.1 -0.2 -0.6 -0.3
carbon source D-Xylose (C) -0.2 -0.9 -0.4 -0.1 +0.2
carbon source Fumarate (C) -0.9 -0.6 +0.1 -0.0 -0.1
carbon source Formate (C) -0.3 -0.5 +0.0 -0.3 -0.3
carbon source L-Phenylalanine (C) -0.9 -0.2 -0.2 +0.1 -0.2
carbon source Gly-Glu (C) -0.5 -0.8 +0.1 +0.0 -0.2
carbon source L-Leucine (C) -0.5 -0.8 +0.3 -0.1 -0.3
carbon source Tween 20 (C) -0.1 -0.9 -0.2 -0.2 +0.2
carbon source pyruvate (C) -0.4 -0.5 +0.1 -0.1 -0.3
carbon source 2-Deoxy-D-Ribose (C) -0.4 -0.5 -0.2 +0.1 -0.3
carbon source D,L-Malic Acid (C) -0.1 -1.0 +0.1 +0.2 -0.4
carbon source L-Leucine (C) +0.2 -0.5 -0.1 -0.4 -0.2
carbon source 4-Hydroxybenzoic Acid (C) +0.2 -0.8 -0.3 -0.0 -0.1
carbon source pyruvate (C) -0.4 -0.5 +0.2 -0.1 -0.2
carbon source L-Glutamine (C) -0.4 -0.6 +0.1 +0.2 -0.2
carbon source D-Fructose (C) -0.4 -0.7 +0.1 +0.3 -0.2
carbon source butyrate (C) -0.3 -0.6 +0.0 +0.3 -0.1
carbon source L-Fucose (C) -0.0 -0.8 +0.6 -0.2 -0.3
carbon source L-Histidine (C) +0.1 -0.7 +0.3 -0.1 -0.4
carbon source L-Tryptophan (C) -0.4 -0.4 +0.2 +0.2 -0.1
carbon source a-Ketoglutaric (C) -0.2 -0.6 +0.4 -0.1 +0.1
carbon source L-tyrosine (C) +0.4 +0.5 -0.3 -0.5 -0.3
carbon source L-Alanine (C) +0.4 -0.4 +0.4 -0.2 -0.2
carbon source D-Mannose (C) +0.2 -0.3 +0.1 +0.5 -0.3
carbon source butyrate (C) -0.1 +0.5 +0.3 +0.3 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 -0.7 +0.2 +0.6 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.1 +0.9 +0.2 +0.2
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