Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS18495 and ABID97_RS18500 overlap by 4 nucleotidesABID97_RS18500 and ABID97_RS18505 are separated by 36 nucleotidesABID97_RS18505 and ABID97_RS18510 are separated by 6 nucleotidesABID97_RS18510 and ABID97_RS18515 are separated by 142 nucleotides ABID97_RS18495: ABID97_RS18495 - DUF2889 domain-containing protein, at 3,812,279 to 3,812,836 _RS18495 ABID97_RS18500: ABID97_RS18500 - CaiB/BaiF CoA-transferase family protein, at 3,812,833 to 3,814,005 _RS18500 ABID97_RS18505: ABID97_RS18505 - transglutaminase family protein, at 3,814,042 to 3,814,719 _RS18505 ABID97_RS18510: ABID97_RS18510 - acyl-CoA dehydrogenase family protein, at 3,814,726 to 3,815,889 _RS18510 ABID97_RS18515: ABID97_RS18515 - TetR/AcrR family transcriptional regulator, at 3,816,032 to 3,816,625 _RS18515
Group Condition ABID97_RS18495 ABID97_RS18500 ABID97_RS18505 ABID97_RS18510 ABID97_RS18515
carbon source L-Alanine (C) -1.1 -0.2 -1.3 -0.5 -1.1
carbon source Adenine (C) -3.0 -0.3 +0.1 -0.2 -0.1
carbon source butyrate (C) -1.0 +0.0 -1.6 -0.3 -0.6
carbon source Glucuronamide (C) -0.4 -0.2 -2.1 -0.4 +0.0
carbon source D-Arabinose (C) -2.8 +0.0 +1.1 -0.6 -0.8
carbon source D,L-Malic Acid (C) -2.5 -0.3 +0.7 -0.1 -1.0
carbon source L-Fucose (C) -0.6 -0.0 -1.3 -0.4 -0.4
r2a outgrowth control R2A outgrowth control -0.7 -0.2 -1.8 -0.3 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.3 +0.1 -1.3 +0.6 -0.7
carbon source D-Fructose (C) -1.0 -0.2 -0.8 -0.4 -0.3
carbon source L-Fucose (C) -1.5 -0.3 +0.0 -0.0 -0.8
carbon source L-Histidine (C) -2.2 -0.4 +0.9 +0.1 -0.7
carbon source L-Glutamic (C) -1.7 -0.4 +0.3 +0.0 -0.1
carbon source D-Xylose (C) -1.3 -0.2 +0.8 -0.2 -0.9
carbon source L-Glutamine (C) -1.7 -0.1 +0.7 -0.3 -0.4
carbon source Gly-Glu (C) -0.4 -0.2 +0.4 -0.5 -0.8
carbon source L-Tryptophan (C) -1.1 -0.3 +0.7 -0.3 -0.6
carbon source pyruvate (C) -1.1 +0.0 +0.4 -0.4 -0.5
carbon source Formate (C) -1.1 +0.1 +0.4 -0.3 -0.5
carbon source Glucuronamide (C) -2.7 +0.0 +0.8 +0.2 +0.4
carbon source D-Lactate (C) -0.9 -0.1 +0.6 -0.2 -0.6
carbon source Formate (C) -1.1 -0.3 +0.6 -0.6 +0.2
carbon source D-Fructose (C) -0.7 -0.2 +0.8 -0.4 -0.7
carbon source D,L-Lactate (C) -1.3 -0.2 +0.6 +0.1 -0.3
carbon source pyruvate (C) -0.5 -0.3 +1.0 -0.4 -0.5
carbon source L-Phenylalanine (C) -0.1 -0.3 +1.1 -0.9 -0.2
carbon source Glycerol (C) -0.0 -0.2 +1.4 -0.6 -0.3
carbon source Tween 20 (C) +0.4 -0.2 +1.2 -0.1 -0.9
carbon source L-Asparagine (C) +0.7 -0.1 +0.9 -0.3 -0.6
carbon source L-tyrosine (C) -1.3 -0.2 +1.3 +0.4 +0.5
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ABID97_RS18495
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ABID97_RS18500
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ABID97_RS18510
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ABID97_RS18515
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