Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS18065 and ABID97_RS18070 are separated by 97 nucleotidesABID97_RS18070 and ABID97_RS18075 are separated by 120 nucleotidesABID97_RS18075 and ABID97_RS18080 are separated by 77 nucleotidesABID97_RS18080 and ABID97_RS18085 are separated by 125 nucleotides ABID97_RS18065: ABID97_RS18065 - class II aldolase/adducin family protein, at 3,731,406 to 3,732,173 _RS18065 ABID97_RS18070: ABID97_RS18070 - bile acid:sodium symporter family protein, at 3,732,271 to 3,733,149 _RS18070 ABID97_RS18075: ABID97_RS18075 - beta-glucosidase BglX, at 3,733,270 to 3,735,543 _RS18075 ABID97_RS18080: ABID97_RS18080 - alpha/beta hydrolase, at 3,735,621 to 3,735,971 _RS18080 ABID97_RS18085: ABID97_RS18085 - LysR family transcriptional regulator, at 3,736,097 to 3,737,068 _RS18085
Group Condition ABID97_RS18065 ABID97_RS18070 ABID97_RS18075 ABID97_RS18080 ABID97_RS18085
carbon source Tween 20 (C) -0.2 -0.1 -0.1 -1.1 -0.2
carbon source 2-Deoxy-D-Ribose (C) +0.1 -0.2 +0.1 -1.0 -0.3
carbon source Tween 20 (C) -0.1 +0.0 -0.0 -0.8 -0.4
carbon source D-Serine (C) +0.0 -0.3 +0.1 -0.8 -0.1
carbon source butyrate (C) +0.0 +0.4 +0.1 -1.1 -0.4
carbon source D-Mannose (C) +0.1 -0.1 +0.1 -0.2 -0.9
carbon source D-Arabinose (C) +0.2 -0.2 -0.1 -0.4 -0.4
carbon source propionate (C) +0.2 +0.4 +0.0 -1.0 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.1 +0.3 -0.7 -0.6
carbon source butyrate (C) +0.1 +0.2 +0.0 -1.0 -0.0
carbon source Glucuronamide (C) +0.2 +0.4 +0.1 -1.6 +0.3
phage V1_10 +0.3 +0.1 -0.0 -0.5 -0.5
carbon source D-Glucose (C) +0.2 -0.2 +0.2 +0.6 -1.2
carbon source L-Histidine (C) +0.0 -0.3 -0.1 +0.5 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -0.0 +0.3 -0.5 +0.3
carbon source L-Alanine (C) -0.2 -0.2 +0.0 +1.1 -0.6
carbon source D-Mannose (C) -0.2 -0.3 +0.2 +0.7 +0.1
carbon source pyruvate (C) +0.1 -0.3 +0.1 +0.8 -0.2
carbon source L-Alanine (C) +0.2 +0.2 -0.1 +0.6 -0.3
r2a outgrowth control R2A outgrowth control +0.3 +0.3 -0.0 -0.4 +0.3
carbon source casaminos (C) +0.1 +0.1 +0.1 -0.3 +0.6
carbon source Ethanol (C) +0.0 +0.1 +0.0 +1.0 -0.6
carbon source L-Phenylalanine (C) +0.0 -0.3 +0.2 +0.8 +0.1
phage V2_100 +0.5 +0.2 -0.2 +0.9 -0.7
carbon source D-Xylose (C) +0.3 -0.1 +0.2 +0.6 -0.2
carbon source 4-Hydroxybenzoic Acid (C) +0.1 -0.3 +0.2 +1.3 -0.4
carbon source D-Glucuronic Acid (C) -0.2 -0.1 -0.1 +1.2 +0.3
carbon source L-Arabinose (C) +0.2 -0.5 -0.1 +1.0 +0.6
phage V2_1 +0.1 +0.3 +0.1 +0.5 +0.5
carbon source D,L-Malic Acid (C) -0.1 +0.5 +0.2 +0.3 +0.7
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