Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS18035 and ABID97_RS18040 are separated by 99 nucleotidesABID97_RS18040 and ABID97_RS18045 overlap by 4 nucleotidesABID97_RS18045 and ABID97_RS18050 are separated by 76 nucleotidesABID97_RS18050 and ABID97_RS18055 are separated by 3 nucleotides ABID97_RS18035: ABID97_RS18035 - PLP-dependent aminotransferase family protein, at 3,725,874 to 3,727,322 _RS18035 ABID97_RS18040: ABID97_RS18040 - NAD(P)-dependent oxidoreductase, at 3,727,422 to 3,728,171 _RS18040 ABID97_RS18045: ABID97_RS18045 - cupin domain-containing protein, at 3,728,168 to 3,728,701 _RS18045 ABID97_RS18050: ABID97_RS18050 - ABC transporter substrate-binding protein, at 3,728,778 to 3,729,944 _RS18050 ABID97_RS18055: ABID97_RS18055 - Crp/Fnr family transcriptional regulator, at 3,729,948 to 3,730,667 _RS18055
Group Condition ABID97_RS18035 ABID97_RS18040 ABID97_RS18045 ABID97_RS18050 ABID97_RS18055
phage V2_100 +0.3 -0.1 -1.0 -0.2 N.D.
carbon source butyrate (C) -0.2 -0.1 -0.6 +0.1 N.D.
plant outgrowth control Plant outgrowth control +0.4 -0.2 +0.1 -0.5 N.D.
carbon source propionate (C) +0.3 +0.2 -0.0 -0.4 N.D.
carbon source Glucuronamide (C) +0.1 +0.3 -0.4 +0.2 N.D.
carbon source D,L-Malic Acid (C) -0.4 +0.1 -0.3 +0.7 N.D.
carbon source L-Histidine (C) +0.2 +0.2 +0.2 -0.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 -0.1 +0.2 -0.3 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 -0.0 +0.5 -0.5 N.D.
carbon source Glucuronamide (C) +0.3 +0.0 -0.3 +0.5 N.D.
carbon source L-Alanine (C) +0.1 -0.1 -0.2 +0.7 N.D.
carbon source L-Glutamic (C) +0.0 -0.1 +0.4 +0.3 N.D.
r2a outgrowth control R2A outgrowth control +0.2 +0.2 +0.4 -0.2 N.D.
carbon source L-Proline (C) +0.3 -0.1 -0.1 +0.5 N.D.
carbon source L-Phenylalanine (C) +0.1 -0.2 +0.3 +0.6 N.D.
carbon source propionate (C) +0.3 -0.2 +0.7 +0.0 N.D.
carbon source D-Serine (C) +0.3 -0.1 +0.2 +0.4 N.D.
carbon source D-Ribose (C) +0.2 +0.1 +0.1 +0.5 N.D.
carbon source D-Fructose (C) +0.2 +0.1 +0.2 +0.3 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.3 +0.2 +0.5 -0.1 N.D.
carbon source Gly-Glu (C) +0.2 +0.1 +0.1 +0.4 N.D.
carbon source D-Glucose (C) +0.2 +0.1 +0.1 +0.6 N.D.
carbon source D-Glucuronic Acid (C) +0.4 -0.2 +0.2 +0.5 N.D.
carbon source pyruvate (C) +0.1 +0.2 +0.1 +0.5 N.D.
carbon source succinate (C) +0.2 +0.2 +0.2 +0.5 N.D.
carbon source D-Fructose (C) +0.2 +0.1 +0.4 +0.4 N.D.
carbon source Formate (C) +0.6 +0.2 -0.3 +0.7 N.D.
carbon source L-Lactate (C) +0.2 +0.3 +0.5 +0.2 N.D.
carbon source L-Threonine (C) +0.4 +0.3 +0.2 +0.4 N.D.
carbon source D,L-Lactate (C) +0.3 +0.2 +0.4 +0.2 N.D.
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