Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS18030 and ABID97_RS18035 are separated by 16 nucleotidesABID97_RS18035 and ABID97_RS18040 are separated by 99 nucleotidesABID97_RS18040 and ABID97_RS18045 overlap by 4 nucleotidesABID97_RS18045 and ABID97_RS18050 are separated by 76 nucleotides ABID97_RS18030: ABID97_RS18030 - tRNA (guanosine(46)-N7)-methyltransferase TrmB, at 3,725,108 to 3,725,857 _RS18030 ABID97_RS18035: ABID97_RS18035 - PLP-dependent aminotransferase family protein, at 3,725,874 to 3,727,322 _RS18035 ABID97_RS18040: ABID97_RS18040 - NAD(P)-dependent oxidoreductase, at 3,727,422 to 3,728,171 _RS18040 ABID97_RS18045: ABID97_RS18045 - cupin domain-containing protein, at 3,728,168 to 3,728,701 _RS18045 ABID97_RS18050: ABID97_RS18050 - ABC transporter substrate-binding protein, at 3,728,778 to 3,729,944 _RS18050
Group Condition ABID97_RS18030 ABID97_RS18035 ABID97_RS18040 ABID97_RS18045 ABID97_RS18050
phage V2_10 -3.2 -0.2 -0.1 +0.2 -0.1
carbon source D-Arabinose (C) -2.7 +0.2 +0.2 +0.1 -0.1
carbon source Glycolic Acid (C) -2.2 +0.3 -0.1 -0.1 -0.2
plant outgrowth control Plant outgrowth control -1.7 +0.4 -0.2 +0.1 -0.5
phage V1_10 -0.9 -0.1 -0.2 -0.2 -0.2
phage V1_10 -1.8 -0.1 +0.3 -0.1 +0.3
carbon source L-Fucose (C) -1.0 +0.3 +0.0 -0.1 -0.3
phage V2_100 +0.2 +0.3 -0.1 -1.0 -0.2
r2a outgrowth control R2A outgrowth control -1.3 +0.2 +0.2 +0.4 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -0.1 -0.1 +0.1 +0.3
carbon source L-Leucine (C) -1.4 +0.3 +0.1 +0.1 +0.4
carbon source D,L-Malic Acid (C) -0.7 -0.4 +0.1 -0.3 +0.7
carbon source L-Histidine (C) -0.6 +0.2 +0.2 +0.2 -0.4
carbon source L-tyrosine (C) -1.0 +0.2 +0.0 -0.0 +0.3
carbon source succinate (C) -0.9 +0.0 +0.0 +0.0 +0.5
carbon source butyrate (C) -0.7 +0.3 +0.2 +0.1 -0.2
carbon source L-Phenylalanine (C) -1.0 +0.1 -0.2 +0.3 +0.6
carbon source D-Fructose (C) -1.0 +0.2 +0.1 +0.2 +0.3
carbon source L-Alanine (C) -0.3 +0.1 -0.1 -0.2 +0.7
carbon source D-Mannose (C) +0.8 -0.2 +0.1 -0.3 -0.0
carbon source L-Arabinose (C) -0.5 +0.3 +0.0 -0.0 +0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.4 -0.0 +0.5 -0.5
carbon source Formate (C) -0.6 +0.6 +0.2 -0.3 +0.7
carbon source Glycerol (C) +0.8 +0.2 -0.2 -0.2 +0.1
carbon source propionate (C) +0.3 +0.3 -0.2 +0.7 +0.0
carbon source D-Glucuronic Acid (C) +0.3 +0.4 -0.2 +0.2 +0.5
carbon source propionate (C) +1.4 +0.3 +0.2 -0.0 -0.4
carbon source D-Fructose (C) +0.4 +0.2 +0.1 +0.4 +0.4
carbon source L-Threonine (C) +1.5 +0.3 +0.2 +0.0 -0.0
carbon source L-Threonine (C) +1.0 +0.4 +0.3 +0.2 +0.4
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