Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS18015 and ABID97_RS18020 are separated by 89 nucleotidesABID97_RS18020 and ABID97_RS18025 are separated by 13 nucleotidesABID97_RS18025 and ABID97_RS18030 overlap by 1 nucleotidesABID97_RS18030 and ABID97_RS18035 are separated by 16 nucleotides ABID97_RS18015: ABID97_RS18015 - LysR family transcriptional regulator, at 3,722,040 to 3,722,993 _RS18015 ABID97_RS18020: ABID97_RS18020 - FAD-dependent oxidoreductase, at 3,723,083 to 3,724,171 _RS18020 ABID97_RS18025: ABID97_RS18025 - tRNA glutamyl-Q(34) synthetase GluQRS, at 3,724,185 to 3,725,108 _RS18025 ABID97_RS18030: ABID97_RS18030 - tRNA (guanosine(46)-N7)-methyltransferase TrmB, at 3,725,108 to 3,725,857 _RS18030 ABID97_RS18035: ABID97_RS18035 - PLP-dependent aminotransferase family protein, at 3,725,874 to 3,727,322 _RS18035
Group Condition ABID97_RS18015 ABID97_RS18020 ABID97_RS18025 ABID97_RS18030 ABID97_RS18035
phage V2_10 +0.0 +0.2 -0.8 -3.2 -0.2
carbon source D-Arabinose (C) +0.2 +0.3 -0.3 -2.7 +0.2
carbon source Glycolic Acid (C) -0.0 +0.3 -0.5 -2.2 +0.3
carbon source L-Histidine (C) -0.2 -0.5 -0.9 -0.6 +0.2
carbon source L-Proline (C) -0.4 -0.6 -0.4 -0.5 -0.1
plant outgrowth control Plant outgrowth control +0.2 -0.2 -0.3 -1.7 +0.4
phage V1_10 +0.1 -0.2 -0.5 -0.9 -0.1
carbon source D,L-Malic Acid (C) -0.4 +0.1 -0.0 -0.7 -0.4
carbon source L-Phenylalanine (C) -0.2 -0.1 -0.1 -1.0 +0.1
carbon source L-Tryptophan (C) +0.1 -0.3 -0.1 -0.9 +0.1
carbon source L-Leucine (C) +0.0 +0.2 -0.3 -1.4 +0.3
carbon source D-Fructose (C) +0.1 +0.1 -0.5 -1.0 +0.2
carbon source butyrate (C) -0.3 -0.7 -0.1 +0.4 -0.2
carbon source L-Fucose (C) -0.2 +0.3 -0.1 -1.0 +0.3
phage V1_10 +0.4 +0.3 +0.4 -1.8 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +0.2 -0.6 -0.9 -0.1
r2a outgrowth control R2A outgrowth control +0.4 -0.0 +0.1 -1.3 +0.2
control NP +0.3 +0.2 -0.5 -0.7 +0.0
carbon source L-tyrosine (C) +0.5 -0.5 +0.1 -1.0 +0.2
carbon source 4-Hydroxybenzoic Acid (C) -0.8 +0.2 -0.3 -0.0 +0.3
phage V1_1 +0.3 +0.2 -0.5 -0.8 +0.2
carbon source L-Histidine (C) +0.1 -0.2 -0.9 +0.3 +0.3
phage V2_100 -0.3 +0.4 -0.5 +0.2 +0.3
carbon source Formate (C) -0.2 +0.1 +0.2 -0.6 +0.6
carbon source Glycerol (C) +0.1 -0.1 -0.4 +0.8 +0.2
carbon source butyrate (C) +0.1 +0.9 +0.2 -0.7 +0.3
carbon source propionate (C) -0.2 +0.0 -0.1 +1.4 +0.3
carbon source L-Threonine (C) -0.2 +0.2 -0.1 +1.0 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.7 +0.3 +0.0 +0.5
carbon source L-Threonine (C) -0.4 +0.2 +0.1 +1.5 +0.3
remove
ABID97_RS18015
plot		 remove
ABID97_RS18020
plot		 remove
ABID97_RS18025		 remove
ABID97_RS18030
plot		 remove
ABID97_RS18035
plot