Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS17950 and ABID97_RS17955 overlap by 4 nucleotidesABID97_RS17955 and ABID97_RS17960 overlap by 4 nucleotidesABID97_RS17960 and ABID97_RS17965 overlap by 4 nucleotidesABID97_RS17965 and ABID97_RS17970 overlap by 4 nucleotides ABID97_RS17950: ABID97_RS17950 - 6,7-dimethyl-8-ribityllumazine synthase, at 3,709,967 to 3,710,434 _RS17950 ABID97_RS17955: ABID97_RS17955 - transcription antitermination factor NusB, at 3,710,431 to 3,710,967 _RS17955 ABID97_RS17960: ABID97_RS17960 - pyridoxal phosphate-dependent aminotransferase, at 3,710,964 to 3,712,160 _RS17960 ABID97_RS17965: ABID97_RS17965 - YbgC/FadM family acyl-CoA thioesterase, at 3,712,157 to 3,712,615 _RS17965 ABID97_RS17970: ABID97_RS17970 - protein TolQ, at 3,712,612 to 3,713,334 _RS17970
Group Condition ABID97_RS17950 ABID97_RS17955 ABID97_RS17960 ABID97_RS17965 ABID97_RS17970
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.2 +0.3 -7.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.1 -0.0 -7.0
carbon source L-Malic (C) N.D. N.D. -0.5 +0.2 -5.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.3 -0.1 -4.9
carbon source Gly-Glu (C) N.D. N.D. -0.3 -0.2 -4.8
carbon source Glycolic Acid (C) N.D. N.D. +0.3 -0.1 -5.4
carbon source D,L-Malic Acid (C) N.D. N.D. +0.2 +0.0 -5.4
carbon source L-Malic (C) N.D. N.D. -0.2 +0.1 -4.8
carbon source Gly-Glu (C) N.D. N.D. -0.2 +0.0 -3.7
carbon source Tween 20 (C) N.D. N.D. +0.1 +0.1 -4.0
carbon source Tween 20 (C) N.D. N.D. +0.1 +0.1 -3.9
carbon source succinate (C) N.D. N.D. -0.4 +0.2 -3.3
carbon source succinate (C) N.D. N.D. -0.2 -0.0 -3.0
carbon source L-Histidine (C) N.D. N.D. -1.2 -0.1 -1.9
carbon source D-Glucuronic Acid (C) N.D. N.D. -0.2 +0.2 -2.9
carbon source D-Xylose (C) N.D. N.D. -0.1 -0.0 -2.4
carbon source D-Xylose (C) N.D. N.D. -0.1 +0.3 -2.7
carbon source D-Gluconic Acid (C) N.D. N.D. -0.1 +0.0 -2.3
carbon source Glycolic Acid (C) N.D. N.D. +0.1 +0.1 -2.5
carbon source D-Gluconic Acid (C) N.D. N.D. -0.1 +0.0 -2.3
carbon source L-Threonine (C) N.D. N.D. -0.5 +0.2 -1.9
carbon source D-Arabinose (C) N.D. N.D. +0.0 +0.1 -2.3
carbon source D-Arabinose (C) N.D. N.D. -0.1 +0.3 -2.2
carbon source a-Ketoglutaric (C) N.D. N.D. +0.1 +0.1 -2.2
carbon source D-Galactose (C) N.D. N.D. -0.2 +0.1 -1.9
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. -0.0 +0.2 -2.1
carbon source L-Histidine (C) N.D. N.D. -1.1 +0.5 -1.2
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. -0.1 +0.4 -2.0
phage V1_1 N.D. N.D. +0.3 +0.1 -1.9
phage V2_100 N.D. N.D. -0.2 -0.1 +3.2
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ABID97_RS17950
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ABID97_RS17955
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