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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. OAS795
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABID97_RS17855 and ABID97_RS17860 are separated by 30 nucleotides
ABID97_RS17860 and ABID97_RS17865 are separated by 16 nucleotides
ABID97_RS17865 and ABID97_RS17870 are separated by 8 nucleotides
ABID97_RS17870 and ABID97_RS17875 are separated by 62 nucleotides
ABID97_RS17855: ABID97_RS17855 - peptidylprolyl isomerase, at 3,686,641 to 3,687,186
_RS17855
ABID97_RS17860: ABID97_RS17860 - peptidylprolyl isomerase, at 3,687,217 to 3,687,729
_RS17860
ABID97_RS17865: ABID97_RS17865 - UDP-2,3-diacylglucosamine diphosphatase, at 3,687,746 to 3,688,528
_RS17865
ABID97_RS17870: ABID97_RS17870 - M90 family metallopeptidase, at 3,688,537 to 3,689,328
_RS17870
ABID97_RS17875: ABID97_RS17875 - DUF349 domain-containing protein, at 3,689,391 to 3,692,264
_RS17875
Group
Condition
ABID97
_RS17855
ABID97
_RS17860
ABID97
_RS17865
ABID97
_RS17870
ABID97
_RS17875
plant outgrowth control
Plant outgrowth control
-0.7
+0.7
N.D.
+0.1
+0.7
carbon source
4-Hydroxybenzoic Acid (C)
-0.2
+1.0
N.D.
-0.4
+0.6
carbon source
D-Ribose (C)
+0.2
+0.7
N.D.
-0.3
+0.9
carbon source
D-Serine (C)
+0.3
+1.1
N.D.
-0.2
+0.4
carbon source
L-Proline (C)
-0.1
+0.9
N.D.
-0.3
+1.1
carbon source
2-Deoxy-D-Ribose (C)
+0.3
+1.1
N.D.
-0.1
+0.5
carbon source
L-Tryptophan (C)
+0.0
+1.2
N.D.
-0.1
+0.8
carbon source
D-Xylose (C)
+0.6
+1.1
N.D.
-0.1
+0.3
carbon source
Glucuronamide (C)
+0.1
+1.2
N.D.
-0.1
+0.7
carbon source
L-tyrosine (C)
+0.2
+1.0
N.D.
-0.0
+0.8
carbon source
Formate (C)
+0.3
+0.9
N.D.
+0.2
+0.7
carbon source
D-Gluconic Acid (C)
+0.3
+1.1
N.D.
+0.0
+0.6
carbon source
D-Mannose (C)
+0.2
+1.5
N.D.
-0.1
+0.4
carbon source
Tween 20 (C)
+0.4
+0.9
N.D.
-0.1
+0.9
carbon source
L-Arabinose (C)
+0.4
+0.8
N.D.
-0.2
+1.1
carbon source
a-Ketoglutaric (C)
+0.3
+0.9
N.D.
-0.1
+1.1
carbon source
a-Ketoglutaric (C)
+0.4
+1.1
N.D.
-0.0
+0.7
carbon source
L-Alanine (C)
+0.5
+1.0
N.D.
+0.1
+0.7
carbon source
Glycerol (C)
+0.3
+0.8
N.D.
-0.1
+1.2
carbon source
butyrate (C)
+0.1
+1.0
N.D.
+0.1
+1.0
carbon source
D-Gluconic Acid (C)
+0.1
+1.4
N.D.
-0.0
+0.8
carbon source
L-Leucine (C)
+0.3
+1.0
N.D.
-0.1
+1.1
carbon source
4-Hydroxybenzoic Acid (C)
+0.2
+1.4
N.D.
+0.2
+0.5
carbon source
D-Glucuronic Acid (C)
+0.0
+0.7
N.D.
+0.3
+1.4
carbon source
2-Deoxy-D-Ribose (C)
+0.4
+1.3
N.D.
+0.1
+0.7
carbon source
L-tyrosine (C)
+0.1
+1.6
N.D.
+0.1
+0.7
carbon source
L-Tryptophan (C)
+0.3
+1.2
N.D.
+0.2
+1.1
carbon source
L-Phenylalanine (C)
-0.3
+1.1
N.D.
+0.0
+1.9
carbon source
L-Leucine (C)
+0.2
+1.4
N.D.
+0.1
+1.0
carbon source
L-Phenylalanine (C)
+0.1
+1.2
N.D.
-0.2
+2.0
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