Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS17720 and ABID97_RS17725 are separated by 508 nucleotidesABID97_RS17725 and ABID97_RS17730 are separated by 1 nucleotidesABID97_RS17730 and ABID97_RS17735 are separated by 120 nucleotidesABID97_RS17735 and ABID97_RS17740 are separated by 127 nucleotides ABID97_RS17720: ABID97_RS17720 - efflux RND transporter permease subunit, at 3,661,107 to 3,664,217 _RS17720 ABID97_RS17725: ABID97_RS17725 - tripartite tricarboxylate transporter permease, at 3,664,726 to 3,666,241 _RS17725 ABID97_RS17730: ABID97_RS17730 - tripartite tricarboxylate transporter TctB family protein, at 3,666,243 to 3,666,779 _RS17730 ABID97_RS17735: ABID97_RS17735 - tripartite tricarboxylate transporter substrate binding protein, at 3,666,900 to 3,667,859 _RS17735 ABID97_RS17740: ABID97_RS17740 - response regulator transcription factor, at 3,667,987 to 3,668,667 _RS17740
Group Condition ABID97_RS17720 ABID97_RS17725 ABID97_RS17730 ABID97_RS17735 ABID97_RS17740
carbon source propionate (C) -0.1 +0.1 -0.6 +1.1 +1.2
carbon source Tween 20 (C) -0.3 -0.2 +0.2 +1.3 +1.7
carbon source L-Leucine (C) -0.0 -0.4 +0.1 +1.3 +1.8
carbon source L-Malic (C) -0.1 -0.0 +0.2 +1.2 +1.6
carbon source propionate (C) +0.2 -0.1 +0.5 +1.1 +1.3
carbon source D-Xylose (C) -0.1 +0.2 +0.5 +1.0 +1.3
carbon source D-Glucose (C) -0.0 -0.2 +0.2 +1.4 +1.5
carbon source L-Leucine (C) -0.0 -0.2 -0.0 +1.5 +1.7
carbon source L-Proline (C) -0.1 +0.2 +0.5 +1.2 +1.3
carbon source Gly-Glu (C) -0.1 -0.1 +0.5 +1.2 +1.6
carbon source butyrate (C) +0.0 -0.1 -0.5 +1.7 +2.0
carbon source D-Xylose (C) +0.0 +0.0 +0.6 +1.3 +1.3
carbon source L-Phenylalanine (C) +0.0 +0.1 +1.2 +1.0 +1.0
carbon source a-Ketoglutaric (C) -0.2 +0.3 +0.8 +1.1 +1.3
carbon source a-Ketoglutaric (C) -0.1 +0.3 +0.8 +1.0 +1.4
carbon source butyrate (C) -0.1 -0.3 -0.0 +1.5 +2.2
carbon source Tween 20 (C) -0.1 -0.0 +0.5 +1.3 +1.8
carbon source Gly-Glu (C) -0.0 -0.0 +0.9 +1.1 +1.6
carbon source L-Histidine (C) +0.7 -0.1 +0.0 +1.5 +1.5
carbon source acetate (C) +0.1 +0.1 +0.7 +1.1 +1.7
carbon source acetate (C) -0.0 +0.1 +1.0 +1.2 +1.5
carbon source L-Tryptophan (C) +0.1 -0.0 +1.1 +1.3 +1.5
carbon source L-Histidine (C) +0.4 -0.2 +0.8 +1.3 +1.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 +0.3 +2.4 +0.7 +0.8
carbon source D-Glucuronic Acid (C) -0.1 +0.5 +0.7 +1.6 +1.7
carbon source Glycolic Acid (C) +0.1 +0.3 +0.7 +1.8 +2.1
carbon source 4-Hydroxybenzoic Acid (C) -0.1 +0.5 +1.3 +2.1 +2.6
carbon source D-Gluconic Acid (C) -0.0 +0.2 +0.8 +2.9 +3.3
carbon source D-Gluconic Acid (C) -0.2 +0.1 +1.0 +3.0 +3.4
carbon source 4-Hydroxybenzoic Acid (C) -0.0 +1.0 +1.8 +2.9 +3.6
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ABID97_RS17720
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ABID97_RS17725
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ABID97_RS17735
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ABID97_RS17740
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