Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS17700 and ABID97_RS17705 are separated by 157 nucleotidesABID97_RS17705 and ABID97_RS17710 overlap by 4 nucleotidesABID97_RS17710 and ABID97_RS17715 overlap by 4 nucleotidesABID97_RS17715 and ABID97_RS17720 overlap by 4 nucleotides ABID97_RS17700: ABID97_RS17700 - sigma 54-interacting transcriptional regulator, at 3,655,976 to 3,657,517 _RS17700 ABID97_RS17705: ABID97_RS17705 - CerR family C-terminal domain-containing protein, at 3,657,675 to 3,658,400 _RS17705 ABID97_RS17710: ABID97_RS17710 - efflux transporter outer membrane subunit, at 3,658,397 to 3,659,890 _RS17710 ABID97_RS17715: ABID97_RS17715 - efflux RND transporter periplasmic adaptor subunit, at 3,659,887 to 3,661,110 _RS17715 ABID97_RS17720: ABID97_RS17720 - efflux RND transporter permease subunit, at 3,661,107 to 3,664,217 _RS17720
Group Condition ABID97_RS17700 ABID97_RS17705 ABID97_RS17710 ABID97_RS17715 ABID97_RS17720
r2a outgrowth control R2A outgrowth control -0.4 -0.0 +0.1 +0.5 -0.2
carbon source D-Mannose (C) -0.3 -0.0 -0.2 +0.7 -0.0
carbon source propionate (C) +0.5 +0.3 -0.2 -0.5 -0.1
plant outgrowth control Plant outgrowth control +0.3 +0.2 +0.3 -0.3 -0.2
carbon source casaminos (C) -0.3 +0.2 +0.3 +0.3 -0.2
carbon source D-Ribose (C) -0.1 +0.3 +0.6 -0.6 +0.1
phage V2_100 -0.2 +0.7 -0.1 +0.2 -0.2
carbon source D,L-Malic Acid (C) -0.5 +0.6 +0.0 +0.3 -0.0
carbon source L-Lactate (C) -0.3 +0.3 -0.1 +0.6 +0.1
carbon source Glucuronamide (C) -0.1 +0.3 +0.2 +0.4 -0.2
carbon source L-Arabinose (C) -0.3 +0.8 -0.0 +0.2 +0.0
carbon source Formate (C) +0.1 +0.2 -0.2 +0.7 -0.1
carbon source L-Histidine (C) -0.1 +0.0 +0.6 -0.1 +0.4
carbon source Fumarate (C) -0.5 +0.2 +0.5 +0.6 -0.0
carbon source L-Malic (C) -0.1 +0.5 +0.1 +0.4 -0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.5 -0.0 -0.2 +0.6 -0.0
carbon source succinate (C) -0.2 +0.3 +0.2 +0.7 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.4 +0.3 +0.9 +0.0
carbon source L-Alanine (C) +0.2 +0.4 +0.2 +0.4 -0.2
carbon source Gly-Glu (C) -0.1 +0.2 +0.2 +0.8 -0.1
carbon source D-Arabinose (C) -0.1 +0.3 +0.2 +0.8 -0.2
carbon source Glycolic Acid (C) -0.1 +0.2 +0.2 +0.9 +0.1
carbon source pyruvate (C) +0.3 +0.1 +0.1 +0.5 +0.1
carbon source Fumarate (C) +0.0 +0.4 +0.3 +0.6 +0.0
carbon source L-Phenylalanine (C) -0.2 +0.4 +0.3 +0.9 +0.0
carbon source L-Histidine (C) -0.1 +0.2 +0.2 +0.5 +0.7
carbon source L-Asparagine (C) +0.0 +0.6 +0.2 +0.6 +0.0
carbon source L-tyrosine (C) +0.2 +0.3 +0.1 +0.8 +0.1
carbon source L-Phenylalanine (C) +0.2 +0.2 +0.4 +0.9 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.5 +1.2 +1.3 -0.0
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