Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS17595 and ABID97_RS17600 are separated by 120 nucleotidesABID97_RS17600 and ABID97_RS17605 are separated by 118 nucleotidesABID97_RS17605 and ABID97_RS17610 are separated by 26 nucleotidesABID97_RS17610 and ABID97_RS17615 are separated by 99 nucleotides ABID97_RS17595: ABID97_RS17595 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 3,633,756 to 3,635,021 _RS17595 ABID97_RS17600: ABID97_RS17600 - ATP-dependent Clp endopeptidase proteolytic subunit ClpP, at 3,635,142 to 3,635,750 _RS17600 ABID97_RS17605: ABID97_RS17605 - trigger factor, at 3,635,869 to 3,637,185 _RS17605 ABID97_RS17610: ABID97_RS17610 - tRNA-Leu, at 3,637,212 to 3,637,298 _RS17610 ABID97_RS17615: ABID97_RS17615 - efflux RND transporter permease subunit, at 3,637,398 to 3,640,553 _RS17615
Group Condition ABID97_RS17595 ABID97_RS17600 ABID97_RS17605 ABID97_RS17610 ABID97_RS17615
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.5 -2.8 -0.6 N.D. -0.0
carbon source D-Gluconic Acid (C) -1.8 -3.4 -0.2 N.D. -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.8 -2.7 -0.7 N.D. +0.3
carbon source Adenine (C) -0.6 -4.1 -1.1 N.D. -0.0
carbon source Glycolic Acid (C) -2.1 -3.5 -0.3 N.D. +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.4 -2.5 -0.2 N.D. +0.5
carbon source Adenine (C) -0.8 -3.9 -0.7 N.D. +0.0
carbon source Tween 20 (C) -2.6 -2.8 +0.0 N.D. -0.2
carbon source D-Gluconic Acid (C) -1.9 -2.8 -0.3 N.D. -0.5
carbon source Tween 20 (C) -2.1 -3.0 -0.1 N.D. -0.3
carbon source L-Histidine (C) -1.4 -3.1 -0.3 N.D. -0.2
carbon source Gly-Glu (C) -1.3 -3.6 +0.2 N.D. -0.2
carbon source L-Proline (C) -1.1 -3.6 +0.0 N.D. -0.2
plant outgrowth control Plant outgrowth control -1.3 -2.8 -0.7 N.D. -0.0
carbon source L-Histidine (C) -1.5 -3.1 -0.2 N.D. +0.0
r2a outgrowth control R2A outgrowth control -1.1 -3.2 -0.3 N.D. -0.2
carbon source D-Arabinose (C) -2.5 -2.6 +0.5 N.D. -0.1
carbon source Gly-Glu (C) -1.3 -3.4 +0.2 N.D. -0.1
carbon source D-Arabinose (C) -2.3 -2.7 +0.6 N.D. -0.1
carbon source L-Leucine (C) -1.2 -3.5 +0.3 N.D. -0.0
carbon source D-Xylose (C) -1.2 -3.6 +0.3 N.D. +0.1
carbon source L-Leucine (C) -1.2 -3.6 +0.4 N.D. -0.1
carbon source D-Mannose (C) -0.3 -4.1 +0.2 N.D. -0.2
carbon source L-Proline (C) -0.9 -3.4 +0.1 N.D. +0.1
carbon source D-Glucose (C) -0.9 -3.6 +0.8 N.D. -0.1
carbon source 2-Deoxy-D-Ribose (C) -0.5 -3.5 +0.5 N.D. -0.2
carbon source D-Glucose (C) -1.2 -3.3 +0.9 N.D. +0.0
carbon source L-Phenylalanine (C) -1.0 -3.1 +1.4 N.D. +0.2
phage V2_10 +1.7 -2.4 -0.9 N.D. +0.3
carbon source propionate (C) -0.5 +3.3 +0.2 N.D. +0.5
remove
ABID97_RS17595
plot		 remove
ABID97_RS17600
plot		 remove
ABID97_RS17605		 remove
ABID97_RS17610
plot		 remove
ABID97_RS17615
plot