Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS17475 and ABID97_RS17480 are separated by 79 nucleotidesABID97_RS17480 and ABID97_RS17485 are separated by 49 nucleotidesABID97_RS17485 and ABID97_RS17490 are separated by 125 nucleotidesABID97_RS17490 and ABID97_RS17495 are separated by 52 nucleotides ABID97_RS17475: ABID97_RS17475 - tripartite tricarboxylate transporter substrate binding protein, at 3,610,253 to 3,611,245 _RS17475 ABID97_RS17480: ABID97_RS17480 - malonyl-CoA decarboxylase, at 3,611,325 to 3,612,797 _RS17480 ABID97_RS17485: ABID97_RS17485 - GntR family transcriptional regulator, at 3,612,847 to 3,613,515 _RS17485 ABID97_RS17490: ABID97_RS17490 - prolipoprotein diacylglyceryl transferase, at 3,613,641 to 3,614,462 _RS17490 ABID97_RS17495: ABID97_RS17495 - LysR family transcriptional regulator, at 3,614,515 to 3,615,453 _RS17495
Group Condition ABID97_RS17475 ABID97_RS17480 ABID97_RS17485 ABID97_RS17490 ABID97_RS17495
carbon source L-Phenylalanine (C) -0.3 -0.6 -0.7 N.D. N.D.
carbon source D-Mannose (C) -0.9 +0.2 -0.5 N.D. N.D.
carbon source propionate (C) +0.1 -0.6 -0.7 N.D. N.D.
carbon source D-Glucose (C) -0.5 -0.3 -0.3 N.D. N.D.
carbon source D-Mannose (C) -0.8 +0.4 -0.6 N.D. N.D.
carbon source Glycolic Acid (C) -0.6 -0.5 +0.4 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.7 +0.2 N.D. N.D.
carbon source Glucuronamide (C) -0.1 +0.3 -0.7 N.D. N.D.
carbon source L-Glutamic (C) +0.3 -0.6 -0.2 N.D. N.D.
carbon source D-Serine (C) +0.3 +0.3 -0.7 N.D. N.D.
carbon source L-Glutamic (C) -0.6 +0.3 +0.3 N.D. N.D.
carbon source Tween 20 (C) -0.2 -0.4 +0.8 N.D. N.D.
carbon source L-Lactate (C) +0.6 -0.3 -0.1 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.7 +0.1 -0.6 N.D. N.D.
carbon source L-Alanine (C) +0.4 +0.4 -0.5 N.D. N.D.
carbon source L-Alanine (C) +0.7 -0.2 -0.2 N.D. N.D.
carbon source D-Glucose (C) +0.3 +0.4 -0.3 N.D. N.D.
phage V2_10 +0.0 -0.3 +0.8 N.D. N.D.
carbon source a-Ketoglutaric (C) -0.2 +0.6 +0.3 N.D. N.D.
r2a outgrowth control R2A outgrowth control +0.5 +0.3 -0.2 N.D. N.D.
carbon source butyrate (C) -0.3 +0.5 +0.5 N.D. N.D.
phage V1_1 -0.2 +0.5 +0.4 N.D. N.D.
carbon source D-Serine (C) +0.2 -0.2 +0.8 N.D. N.D.
carbon source L-Fucose (C) +0.1 +0.7 +0.2 N.D. N.D.
control NP +0.4 +0.5 +0.2 N.D. N.D.
phage V2_1 -0.1 +0.7 +0.6 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.9 -0.1 +0.5 N.D. N.D.
carbon source L-Glutamine (C) +0.6 +0.4 +0.4 N.D. N.D.
carbon source propionate (C) +0.8 +0.5 +0.5 N.D. N.D.
carbon source D,L-Malic Acid (C) +0.9 +0.0 +1.1 N.D. N.D.
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