Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS17395 and ABID97_RS17400 are separated by 31 nucleotidesABID97_RS17400 and ABID97_RS17405 overlap by 4 nucleotidesABID97_RS17405 and ABID97_RS17410 are separated by 14 nucleotidesABID97_RS17410 and ABID97_RS17415 overlap by 4 nucleotides ABID97_RS17395: ABID97_RS17395 - cob(I)yrinic acid a,c-diamide adenosyltransferase, at 3,594,813 to 3,595,382 _RS17395 ABID97_RS17400: ABID97_RS17400 - ABC transporter ATP-binding protein, at 3,595,414 to 3,596,196 _RS17400 ABID97_RS17405: ABID97_RS17405 - iron ABC transporter permease, at 3,596,193 to 3,597,203 _RS17405 ABID97_RS17410: ABID97_RS17410 - helical backbone metal receptor, at 3,597,218 to 3,598,087 _RS17410 ABID97_RS17415: ABID97_RS17415 - bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase, at 3,598,084 to 3,598,671 _RS17415
Group Condition ABID97_RS17395 ABID97_RS17400 ABID97_RS17405 ABID97_RS17410 ABID97_RS17415
carbon source L-Threonine (C) +0.1 N.D. N.D. -2.8 N.D.
carbon source L-Threonine (C) +0.4 N.D. N.D. -2.8 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.2 N.D. N.D. -1.1 N.D.
r2a outgrowth control R2A outgrowth control -0.1 N.D. N.D. -1.0 N.D.
carbon source D-Lactate (C) -0.1 N.D. N.D. -0.9 N.D.
carbon source pyruvate (C) -0.1 N.D. N.D. -0.8 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 N.D. N.D. -0.8 N.D.
carbon source Fumarate (C) -0.4 N.D. N.D. -0.3 N.D.
carbon source Gly-Glu (C) -0.2 N.D. N.D. -0.5 N.D.
phage V1_10 -0.3 N.D. N.D. -0.4 N.D.
carbon source L-Fucose (C) -0.1 N.D. N.D. -0.5 N.D.
carbon source L-Malic (C) +0.0 N.D. N.D. -0.7 N.D.
carbon source butyrate (C) -0.1 N.D. N.D. -0.5 N.D.
carbon source L-Glutamine (C) +0.2 N.D. N.D. -0.7 N.D.
carbon source L-Glutamic (C) +0.1 N.D. N.D. -0.5 N.D.
carbon source casaminos (C) +0.2 N.D. N.D. -0.5 N.D.
carbon source L-Proline (C) -0.5 N.D. N.D. +0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 N.D. N.D. -0.7 N.D.
carbon source L-Lactate (C) +0.4 N.D. N.D. -0.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 N.D. N.D. -0.4 N.D.
carbon source Glycolic Acid (C) +0.9 N.D. N.D. -0.4 N.D.
carbon source D-Serine (C) +0.2 N.D. N.D. +0.5 N.D.
carbon source Ethanol (C) +0.5 N.D. N.D. +0.2 N.D.
carbon source L-Alanine (C) -0.0 N.D. N.D. +0.8 N.D.
carbon source L-tyrosine (C) +0.1 N.D. N.D. +0.7 N.D.
carbon source D-Glucuronic Acid (C) +0.2 N.D. N.D. +0.8 N.D.
carbon source L-Phenylalanine (C) -0.3 N.D. N.D. +1.2 N.D.
carbon source D-Serine (C) +0.3 N.D. N.D. +1.2 N.D.
carbon source propionate (C) -0.0 N.D. N.D. +5.4 N.D.
carbon source propionate (C) +0.6 N.D. N.D. +4.9 N.D.
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ABID97_RS17415
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