Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS17335 and ABID97_RS17340 overlap by 4 nucleotidesABID97_RS17340 and ABID97_RS17345 are separated by 79 nucleotidesABID97_RS17345 and ABID97_RS17350 are separated by 18 nucleotidesABID97_RS17350 and ABID97_RS17355 are separated by 40 nucleotides ABID97_RS17335: ABID97_RS17335 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, at 3,580,394 to 3,581,443 _RS17335 ABID97_RS17340: ABID97_RS17340 - cobyric acid synthase, at 3,581,440 to 3,582,879 _RS17340 ABID97_RS17345: ABID97_RS17345 - efflux transporter outer membrane subunit, at 3,582,959 to 3,584,452 _RS17345 ABID97_RS17350: ABID97_RS17350 - efflux RND transporter permease subunit, at 3,584,471 to 3,587,746 _RS17350 ABID97_RS17355: ABID97_RS17355 - efflux RND transporter periplasmic adaptor subunit, at 3,587,787 to 3,589,037 _RS17355
Group Condition ABID97_RS17335 ABID97_RS17340 ABID97_RS17345 ABID97_RS17350 ABID97_RS17355
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.1 -0.1 -0.4 -0.3
carbon source Adenine (C) N.D. -0.8 +0.2 -0.1 +0.3
plant outgrowth control Plant outgrowth control N.D. +0.3 -0.1 -0.2 -0.2
carbon source L-tyrosine (C) N.D. +0.4 -0.8 +0.2 +0.1
r2a outgrowth control R2A outgrowth control N.D. +0.3 +0.2 -0.1 -0.3
r2a outgrowth control R2A outgrowth control N.D. -0.1 +0.4 -0.2 +0.1
carbon source acetate (C) N.D. +0.2 +0.2 -0.2 +0.2
carbon source D,L-Malic Acid (C) N.D. +0.2 -0.2 +0.3 +0.1
carbon source butyrate (C) N.D. -0.2 +0.3 +0.2 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.2 +0.5 -0.1 -0.0
carbon source Formate (C) N.D. +0.4 +0.3 -0.1 +0.1
carbon source L-Glutamine (C) N.D. +0.4 +0.0 -0.0 +0.4
carbon source D-Gluconic Acid (C) N.D. +0.2 -0.1 +0.3 +0.4
carbon source D-Ribose (C) N.D. +0.1 +0.2 -0.0 +0.5
carbon source L-Histidine (C) N.D. +0.3 -0.0 +0.1 +0.4
carbon source L-Lactate (C) N.D. +0.3 +0.1 +0.2 +0.3
carbon source D-Glucose (C) N.D. +0.0 +0.0 +0.2 +0.6
carbon source D,L-Lactate (C) N.D. +0.0 +0.2 +0.3 +0.4
carbon source Formate (C) N.D. +0.0 +0.3 +0.1 +0.4
carbon source butyrate (C) N.D. +0.0 +0.1 +0.3 +0.4
carbon source Glycolic Acid (C) N.D. +0.2 +0.2 +0.2 +0.3
carbon source Glycolic Acid (C) N.D. +0.1 +0.4 +0.1 +0.2
carbon source L-Leucine (C) N.D. +0.3 +0.3 -0.0 +0.4
carbon source D,L-Malic Acid (C) N.D. +0.1 +0.3 +0.1 +0.4
carbon source L-Asparagine (C) N.D. +0.2 +0.4 +0.0 +0.4
carbon source D,L-Lactate (C) N.D. +0.1 +0.5 +0.2 +0.2
carbon source D-Galactose (C) N.D. +0.2 +0.2 +0.1 +0.5
carbon source propionate (C) N.D. +0.2 +0.2 +0.5 +0.2
carbon source D-Glucuronic Acid (C) N.D. +0.7 -0.0 -0.0 +0.4
carbon source propionate (C) N.D. +1.0 +0.2 +0.4 +0.1
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ABID97_RS17335
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ABID97_RS17340
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ABID97_RS17350
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ABID97_RS17355
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