Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS17325 and ABID97_RS17330 overlap by 4 nucleotidesABID97_RS17330 and ABID97_RS17335 are separated by 5 nucleotidesABID97_RS17335 and ABID97_RS17340 overlap by 4 nucleotidesABID97_RS17340 and ABID97_RS17345 are separated by 79 nucleotides ABID97_RS17325: ABID97_RS17325 - histidine phosphatase family protein, at 3,579,046 to 3,579,597 _RS17325 ABID97_RS17330: ABID97_RS17330 - adenosylcobinamide-GDP ribazoletransferase, at 3,579,594 to 3,580,388 _RS17330 ABID97_RS17335: ABID97_RS17335 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, at 3,580,394 to 3,581,443 _RS17335 ABID97_RS17340: ABID97_RS17340 - cobyric acid synthase, at 3,581,440 to 3,582,879 _RS17340 ABID97_RS17345: ABID97_RS17345 - efflux transporter outer membrane subunit, at 3,582,959 to 3,584,452 _RS17345
Group Condition ABID97_RS17325 ABID97_RS17330 ABID97_RS17335 ABID97_RS17340 ABID97_RS17345
carbon source L-Asparagine (C) N.D. -1.6 N.D. -0.2 +0.2
carbon source L-tyrosine (C) N.D. -1.0 N.D. +0.4 -0.8
phage V2_1 N.D. -0.9 N.D. -0.2 -0.1
plant outgrowth control Plant outgrowth control N.D. -1.3 N.D. +0.3 -0.1
phage V2_1 N.D. -0.7 N.D. -0.2 -0.2
carbon source L-tyrosine (C) N.D. -0.9 N.D. -0.0 -0.1
carbon source Glucuronamide (C) N.D. -1.5 N.D. +0.3 +0.3
carbon source 2-Deoxy-D-Ribose (C) N.D. -1.3 N.D. +0.1 +0.2
carbon source butyrate (C) N.D. -1.0 N.D. -0.2 +0.3
carbon source Adenine (C) N.D. -0.1 N.D. -0.8 +0.2
carbon source D-Ribose (C) N.D. -0.7 N.D. +0.1 +0.2
carbon source L-Glutamine (C) N.D. -0.6 N.D. +0.4 +0.0
r2a outgrowth control R2A outgrowth control N.D. -0.7 N.D. +0.3 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.6 N.D. +0.2 +0.5
carbon source D-Ribose (C) N.D. +0.9 N.D. -0.2 +0.1
carbon source propionate (C) N.D. -0.3 N.D. +1.0 +0.2
carbon source L-Fucose (C) N.D. +1.1 N.D. -0.1 +0.0
carbon source Glycolic Acid (C) N.D. +0.6 N.D. +0.2 +0.2
carbon source D-Sorbitol (C) N.D. +0.8 N.D. +0.2 +0.1
carbon source L-Malic (C) N.D. +0.7 N.D. +0.3 +0.1
carbon source Formate (C) N.D. +0.4 N.D. +0.4 +0.3
phage V2_100 N.D. +1.5 N.D. -0.2 -0.2
carbon source L-Leucine (C) N.D. +0.6 N.D. +0.3 +0.3
carbon source L-Alanine (C) N.D. +0.8 N.D. +0.1 +0.2
carbon source a-Ketoglutaric (C) N.D. +0.9 N.D. +0.2 +0.0
carbon source L-Threonine (C) N.D. +0.8 N.D. +0.1 +0.2
carbon source D-Arabinose (C) N.D. +0.8 N.D. +0.2 +0.1
carbon source D,L-Malic Acid (C) N.D. +1.2 N.D. +0.2 -0.2
carbon source L-Alanine (C) N.D. +0.6 N.D. +0.5 +0.1
carbon source D-Glucuronic Acid (C) N.D. +1.0 N.D. +0.7 -0.0
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ABID97_RS17325
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ABID97_RS17330
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