Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS17180 and ABID97_RS17185 overlap by 11 nucleotidesABID97_RS17185 and ABID97_RS17190 are separated by 30 nucleotidesABID97_RS17190 and ABID97_RS17195 are separated by 11 nucleotidesABID97_RS17195 and ABID97_RS17200 are separated by 61 nucleotides ABID97_RS17180: ABID97_RS17180 - D-amino acid dehydrogenase, at 3,550,370 to 3,551,623 _RS17180 ABID97_RS17185: ABID97_RS17185 - hypothetical protein, at 3,551,613 to 3,552,041 _RS17185 ABID97_RS17190: ABID97_RS17190 - NAD(P)H-hydrate dehydratase, at 3,552,072 to 3,553,526 _RS17190 ABID97_RS17195: ABID97_RS17195 - SDR family oxidoreductase, at 3,553,538 to 3,554,302 _RS17195 ABID97_RS17200: ABID97_RS17200 - ribonuclease R, at 3,554,364 to 3,556,631 _RS17200
Group Condition ABID97_RS17180 ABID97_RS17185 ABID97_RS17190 ABID97_RS17195 ABID97_RS17200
carbon source Glycolic Acid (C) -0.1 N.D. +0.2 -0.9 -1.5
carbon source L-Histidine (C) -0.2 N.D. -0.2 -0.3 -1.8
carbon source Adenine (C) -0.1 N.D. -0.9 +0.1 -1.6
carbon source 4-Hydroxybenzoic Acid (C) -0.2 N.D. -0.6 -0.3 -1.3
carbon source D-Arabinose (C) -0.3 N.D. -0.3 -0.1 -1.6
carbon source L-Arabinose (C) -0.1 N.D. -0.2 -0.5 -1.3
carbon source D,L-Malic Acid (C) -0.3 N.D. +0.2 -0.2 -1.8
carbon source 2-Deoxy-D-Ribose (C) -0.2 N.D. -0.2 -0.2 -1.4
carbon source L-Phenylalanine (C) -0.1 N.D. +0.1 -0.2 -1.8
carbon source L-Phenylalanine (C) -0.3 N.D. +0.2 +0.1 -2.0
carbon source D-Gluconic Acid (C) -0.1 N.D. +0.1 -0.2 -1.8
carbon source D-Gluconic Acid (C) -0.2 N.D. +0.2 -0.1 -1.9
carbon source L-Arabinose (C) -0.2 N.D. -0.1 -0.2 -1.4
carbon source D-Xylose (C) -0.2 N.D. +0.0 -0.1 -1.6
carbon source Glycolic Acid (C) -0.3 N.D. +0.1 -0.5 -1.2
carbon source L-Histidine (C) -0.1 N.D. +0.2 -0.1 -1.9
carbon source D-Xylose (C) -0.2 N.D. +0.1 -0.1 -1.6
carbon source Tween 20 (C) -0.2 N.D. +0.1 -0.0 -1.6
carbon source Adenine (C) +0.0 N.D. -0.3 -0.1 -1.4
carbon source D-Arabinose (C) -0.3 N.D. +0.3 -0.2 -1.6
carbon source L-Glutamic (C) -0.3 N.D. +0.0 -0.1 -1.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 N.D. -0.2 -0.1 -1.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 N.D. +0.1 +0.1 -2.0
carbon source D-Ribose (C) -0.1 N.D. +0.2 -1.0 -0.7
carbon source L-Proline (C) +0.0 N.D. +0.0 -0.1 -1.5
carbon source D-Ribose (C) -0.2 N.D. +0.2 -1.0 -0.5
carbon source Tween 20 (C) -0.2 N.D. +0.3 -0.0 -1.5
carbon source L-Leucine (C) +0.1 N.D. +0.4 -0.4 -1.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 N.D. +0.3 +0.0 -1.3
phage V2_100 -0.1 N.D. -0.3 -0.2 +2.4
remove
ABID97_RS17180
plot		 remove
ABID97_RS17185
plot		 remove
ABID97_RS17190		 remove
ABID97_RS17195
plot		 remove
ABID97_RS17200
plot