Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS17090 and ABID97_RS17095 are separated by 199 nucleotidesABID97_RS17095 and ABID97_RS17100 are separated by 8 nucleotidesABID97_RS17100 and ABID97_RS17105 overlap by 29 nucleotidesABID97_RS17105 and ABID97_RS17110 are separated by 7 nucleotides ABID97_RS17090: ABID97_RS17090 - glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit, at 3,532,055 to 3,533,239 _RS17090 ABID97_RS17095: ABID97_RS17095 - RNA methyltransferase, at 3,533,439 to 3,534,233 _RS17095 ABID97_RS17100: ABID97_RS17100 - ribonuclease HII, at 3,534,242 to 3,534,961 _RS17100 ABID97_RS17105: ABID97_RS17105 - lipid-A-disaccharide synthase, at 3,534,933 to 3,536,084 _RS17105 ABID97_RS17110: ABID97_RS17110 - acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase, at 3,536,092 to 3,536,880 _RS17110
Group Condition ABID97_RS17090 ABID97_RS17095 ABID97_RS17100 ABID97_RS17105 ABID97_RS17110
carbon source propionate (C) N.D. N.D. -0.6 N.D. N.D.
carbon source D,L-Malic Acid (C) N.D. N.D. -0.6 N.D. N.D.
carbon source a-Ketoglutaric (C) N.D. N.D. -0.5 N.D. N.D.
carbon source L-Alanine (C) N.D. N.D. -0.5 N.D. N.D.
carbon source D-Arabinose (C) N.D. N.D. -0.5 N.D. N.D.
carbon source D,L-Malic Acid (C) N.D. N.D. -0.4 N.D. N.D.
carbon source a-Ketoglutaric (C) N.D. N.D. -0.4 N.D. N.D.
carbon source L-Glutamine (C) N.D. N.D. -0.4 N.D. N.D.
carbon source L-Alanine (C) N.D. N.D. -0.4 N.D. N.D.
carbon source L-Arabinose (C) N.D. N.D. -0.4 N.D. N.D.
phage V2_100 N.D. N.D. -0.4 N.D. N.D.
carbon source pyruvate (C) N.D. N.D. -0.3 N.D. N.D.
carbon source L-Glutamic (C) N.D. N.D. -0.3 N.D. N.D.
carbon source D-Serine (C) N.D. N.D. -0.3 N.D. N.D.
carbon source D-Sorbitol (C) N.D. N.D. -0.3 N.D. N.D.
carbon source L-Arabinose (C) N.D. N.D. -0.3 N.D. N.D.
carbon source L-Histidine (C) N.D. N.D. -0.3 N.D. N.D.
carbon source L-Histidine (C) N.D. N.D. -0.3 N.D. N.D.
carbon source Glucuronamide (C) N.D. N.D. +0.3 N.D. N.D.
carbon source Glucuronamide (C) N.D. N.D. +0.3 N.D. N.D.
r2a outgrowth control R2A outgrowth control N.D. N.D. +0.3 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.3 N.D. N.D.
carbon source D-Serine (C) N.D. N.D. +0.3 N.D. N.D.
plant outgrowth control Plant outgrowth control N.D. N.D. +0.3 N.D. N.D.
carbon source D-Glucose (C) N.D. N.D. +0.3 N.D. N.D.
r2a outgrowth control R2A outgrowth control N.D. N.D. +0.4 N.D. N.D.
carbon source D-Gluconic Acid (C) N.D. N.D. +0.4 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.4 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.5 N.D. N.D.
plant outgrowth control Plant outgrowth control N.D. N.D. +0.6 N.D. N.D.
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