Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS17070 and ABID97_RS17075 are separated by 63 nucleotidesABID97_RS17075 and ABID97_RS17080 are separated by 8 nucleotidesABID97_RS17080 and ABID97_RS17085 are separated by 1 nucleotidesABID97_RS17085 and ABID97_RS17090 are separated by 10 nucleotides ABID97_RS17070: ABID97_RS17070 - transcription elongation factor GreA, at 3,526,837 to 3,527,313 _RS17070 ABID97_RS17075: ABID97_RS17075 - Kdo hydroxylase family protein, at 3,527,377 to 3,528,246 _RS17075 ABID97_RS17080: ABID97_RS17080 - carbamoyl-phosphate synthase large subunit, at 3,528,255 to 3,531,503 _RS17080 ABID97_RS17085: ABID97_RS17085 - ORF6N domain-containing protein, at 3,531,505 to 3,532,044 _RS17085 ABID97_RS17090: ABID97_RS17090 - glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit, at 3,532,055 to 3,533,239 _RS17090
Group Condition ABID97_RS17070 ABID97_RS17075 ABID97_RS17080 ABID97_RS17085 ABID97_RS17090
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.6 -0.3 N.D. -1.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -0.9 N.D. -1.2 N.D.
plant outgrowth control Plant outgrowth control -0.6 -1.8 N.D. +0.0 N.D.
carbon source D-Gluconic Acid (C) -0.5 -1.4 N.D. -0.2 N.D.
plant outgrowth control Plant outgrowth control +0.2 -1.7 N.D. -0.2 N.D.
carbon source L-Glutamic (C) -0.7 +0.3 N.D. -1.1 N.D.
carbon source butyrate (C) -0.4 +0.2 N.D. -1.3 N.D.
carbon source L-Asparagine (C) -0.6 +0.5 N.D. -1.4 N.D.
carbon source pyruvate (C) -0.7 +0.4 N.D. -1.0 N.D.
carbon source D-Ribose (C) -0.4 +0.5 N.D. -1.3 N.D.
carbon source Gly-Glu (C) +0.6 -1.2 N.D. -0.1 N.D.
carbon source Gly-Glu (C) +1.1 -1.3 N.D. -0.3 N.D.
carbon source Tween 20 (C) +0.5 -1.4 N.D. +0.3 N.D.
carbon source Tween 20 (C) +0.6 -1.2 N.D. +0.1 N.D.
carbon source Formate (C) -0.4 +0.8 N.D. -0.9 N.D.
r2a outgrowth control R2A outgrowth control +0.9 -0.2 N.D. -0.7 N.D.
carbon source L-Tryptophan (C) -0.1 +1.1 N.D. -0.9 N.D.
carbon source L-Tryptophan (C) -0.1 +1.3 N.D. -0.9 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.7 +0.9 N.D. -1.0 N.D.
carbon source L-Phenylalanine (C) -0.2 +1.6 N.D. -0.6 N.D.
carbon source L-Leucine (C) +0.7 +0.8 N.D. -0.7 N.D.
carbon source L-tyrosine (C) +1.0 +0.7 N.D. -0.6 N.D.
phage V1_10 +0.2 +1.7 N.D. -0.2 N.D.
carbon source D-Fructose (C) +0.6 +1.2 N.D. +0.1 N.D.
carbon source L-Phenylalanine (C) -0.1 +1.7 N.D. +0.4 N.D.
phage V2_10 +0.2 +1.8 N.D. +0.0 N.D.
phage V1_10 +0.2 +1.6 N.D. +0.3 N.D.
carbon source propionate (C) +0.6 +1.8 N.D. -0.1 N.D.
phage V2_10 +0.3 +1.7 N.D. +0.6 N.D.
phage V2_100 -0.7 +4.8 N.D. +0.9 N.D.
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ABID97_RS17070
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ABID97_RS17075
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ABID97_RS17085
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ABID97_RS17090
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