Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS17010 and ABID97_RS17015 are separated by 59 nucleotidesABID97_RS17015 and ABID97_RS17020 are separated by 1 nucleotidesABID97_RS17020 and ABID97_RS17025 are separated by 30 nucleotidesABID97_RS17025 and ABID97_RS17030 are separated by 81 nucleotides ABID97_RS17010: ABID97_RS17010 - oxepin-CoA hydrolase, alternative type, at 3,515,419 to 3,516,198 _RS17010 ABID97_RS17015: ABID97_RS17015 - Crp/Fnr family transcriptional regulator, at 3,516,258 to 3,516,977 _RS17015 ABID97_RS17020: ABID97_RS17020 - phosphotransferase, at 3,516,979 to 3,518,085 _RS17020 ABID97_RS17025: ABID97_RS17025 - acyl-CoA dehydrogenase family protein, at 3,518,116 to 3,519,387 _RS17025 ABID97_RS17030: ABID97_RS17030 - GNAT family N-acetyltransferase, at 3,519,469 to 3,519,957 _RS17030
Group Condition ABID97_RS17010 ABID97_RS17015 ABID97_RS17020 ABID97_RS17025 ABID97_RS17030
carbon source L-tyrosine (C) +0.1 -1.4 -0.1 +0.2 -1.7
carbon source 2-Deoxy-D-Ribose (C) -0.2 -0.2 -1.5 -0.1 +0.5
phage V2_100 -0.1 -0.1 +0.1 -0.1 -1.3
carbon source 2-Deoxy-D-Ribose (C) +0.1 -0.1 -1.3 +0.0 -0.1
carbon source L-Histidine (C) -0.2 +0.0 -0.2 -0.6 -0.4
carbon source L-Threonine (C) -0.7 -0.1 -0.1 -0.2 -0.1
control NP -0.1 +0.2 -0.1 -0.2 -0.7
carbon source L-tyrosine (C) +0.2 -0.1 -1.1 -0.4 +0.7
carbon source D-Glucose (C) -0.7 +0.2 -0.1 +0.1 -0.2
carbon source acetate (C) -0.1 -0.4 -0.2 -0.4 +0.4
carbon source butyrate (C) +0.2 -0.6 -0.2 +0.0 +0.1
carbon source L-Arabinose (C) +0.3 -0.8 -0.2 -0.0 +0.3
phage V1_1 +0.2 +0.2 -0.0 +0.1 -0.9
carbon source D,L-Lactate (C) -0.1 -0.6 -0.2 -0.1 +0.5
phage V1_10 +0.2 +0.4 -0.1 +0.2 -1.0
carbon source L-Glutamine (C) +0.2 +0.3 -0.1 -0.2 -0.3
carbon source Glucuronamide (C) +0.3 +0.0 -0.1 +0.3 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 -0.1 -0.5 +0.3 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 -0.2 -0.5 +0.7 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.2 -0.3 +0.4 -0.4
carbon source L-Histidine (C) +0.3 +0.4 -0.4 -0.7 +0.5
carbon source L-Alanine (C) +0.5 +0.1 -0.1 -0.5 +0.1
carbon source D,L-Lactate (C) -0.3 -0.1 -0.1 -0.2 +0.9
carbon source L-Alanine (C) +0.1 +0.2 -0.2 -0.4 +0.5
carbon source L-Leucine (C) +0.3 -0.0 -0.1 -0.4 +0.6
carbon source D,L-Malic Acid (C) -0.3 +0.2 -0.0 +0.0 +0.5
carbon source butyrate (C) +0.2 -0.3 -0.1 +0.0 +0.7
carbon source Formate (C) +0.4 -0.3 +0.1 -0.1 +0.7
carbon source L-Fucose (C) +0.2 -0.1 +0.1 +0.1 +0.7
carbon source D-Glucose (C) +0.4 +0.5 +0.0 -0.1 +0.4
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