Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS16990 and ABID97_RS16995 are separated by 91 nucleotidesABID97_RS16995 and ABID97_RS17000 are separated by 60 nucleotidesABID97_RS17000 and ABID97_RS17005 are separated by 129 nucleotidesABID97_RS17005 and ABID97_RS17010 are separated by 27 nucleotides ABID97_RS16990: ABID97_RS16990 - hypothetical protein, at 3,511,053 to 3,511,424 _RS16990 ABID97_RS16995: ABID97_RS16995 - D-2-hydroxyacid dehydrogenase family protein, at 3,511,516 to 3,512,523 _RS16995 ABID97_RS17000: ABID97_RS17000 - MFS transporter, at 3,512,584 to 3,513,741 _RS17000 ABID97_RS17005: ABID97_RS17005 - 3-hydroxyacyl-CoA dehydrogenase, at 3,513,871 to 3,515,391 _RS17005 ABID97_RS17010: ABID97_RS17010 - oxepin-CoA hydrolase, alternative type, at 3,515,419 to 3,516,198 _RS17010
Group Condition ABID97_RS16990 ABID97_RS16995 ABID97_RS17000 ABID97_RS17005 ABID97_RS17010
carbon source D-Glucose (C) N.D. +0.1 +0.0 -0.2 -0.7
carbon source L-Proline (C) N.D. +0.1 -0.3 -0.4 -0.1
carbon source butyrate (C) N.D. -0.5 -0.3 +0.1 +0.2
carbon source a-Ketoglutaric (C) N.D. +0.3 -0.2 -0.3 -0.2
carbon source Glycerol (C) N.D. +0.5 -0.2 -0.3 -0.4
carbon source D-Ribose (C) N.D. +0.3 -0.2 +0.1 -0.4
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.4 +0.2 -0.5 -0.2
carbon source D-Galactose (C) N.D. +0.6 -0.2 -0.2 -0.4
carbon source Glycolic Acid (C) N.D. +0.5 -0.3 -0.2 -0.1
carbon source L-Alanine (C) N.D. -0.3 -0.2 -0.2 +0.5
carbon source L-Threonine (C) N.D. +0.5 +0.2 -0.1 -0.7
phage V1_10 N.D. +0.5 -0.2 -0.3 +0.0
carbon source L-Threonine (C) N.D. +0.4 +0.2 -0.1 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.5 -0.3 -0.3 +0.4
carbon source Ethanol (C) N.D. +0.5 +0.3 -0.4 -0.1
carbon source 4-Hydroxybenzoic Acid (C) N.D. +1.1 -0.2 -0.5 +0.0
phage V1_10 N.D. +0.5 -0.2 -0.1 +0.2
carbon source Ethanol (C) N.D. +0.5 +0.1 -0.3 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.3 -0.2 +0.0 +0.5
carbon source L-Arabinose (C) N.D. +0.5 -0.3 +0.1 +0.3
carbon source L-Histidine (C) N.D. +0.5 -0.1 -0.1 +0.3
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.5 +0.2 -0.2 +0.1
carbon source Formate (C) N.D. +0.4 -0.1 +0.0 +0.4
phage V2_100 N.D. +1.1 -0.1 -0.1 -0.1
carbon source casaminos (C) N.D. +0.5 +0.2 +0.3 -0.1
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.9 -0.1 +0.1 +0.1
carbon source Gly-Glu (C) N.D. +0.3 +0.1 +0.3 +0.4
carbon source D-Fructose (C) N.D. +1.0 -0.0 -0.1 +0.2
plant outgrowth control Plant outgrowth control N.D. +0.3 +0.1 -0.1 +0.7
carbon source D-Fructose (C) N.D. +1.3 -0.1 -0.1 +0.1
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ABID97_RS16990
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ABID97_RS16995
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ABID97_RS17005
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ABID97_RS17010
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