Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS16970 and ABID97_RS16975 are separated by 134 nucleotidesABID97_RS16975 and ABID97_RS16980 are separated by 12 nucleotidesABID97_RS16980 and ABID97_RS16985 are separated by 72 nucleotidesABID97_RS16985 and ABID97_RS16990 are separated by 139 nucleotides ABID97_RS16970: ABID97_RS16970 - 3-deoxy-manno-octulosonate cytidylyltransferase, at 3,507,594 to 3,508,367 _RS16970 ABID97_RS16975: ABID97_RS16975 - adenylate kinase, at 3,508,502 to 3,509,158 _RS16975 ABID97_RS16980: ABID97_RS16980 - asparaginase, at 3,509,171 to 3,510,166 _RS16980 ABID97_RS16985: ABID97_RS16985 - transcriptional repressor LexA, at 3,510,239 to 3,510,913 _RS16985 ABID97_RS16990: ABID97_RS16990 - hypothetical protein, at 3,511,053 to 3,511,424 _RS16990
Group Condition ABID97_RS16970 ABID97_RS16975 ABID97_RS16980 ABID97_RS16985 ABID97_RS16990
carbon source D-Gluconic Acid (C) N.D. N.D. -0.3 -4.3 N.D.
carbon source acetate (C) N.D. N.D. -0.4 -3.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.5 -3.7 N.D.
carbon source Glucuronamide (C) N.D. N.D. -0.2 -2.9 N.D.
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. -0.5 -2.6 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.1 -3.1 N.D.
carbon source D,L-Malic Acid (C) N.D. N.D. -0.2 -2.6 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.5 -3.2 N.D.
carbon source casaminos (C) N.D. N.D. -0.0 -2.7 N.D.
carbon source L-Proline (C) N.D. N.D. -0.1 -2.5 N.D.
carbon source D-Xylose (C) N.D. N.D. +0.2 -2.7 N.D.
carbon source L-Arabinose (C) N.D. N.D. -0.2 -2.3 N.D.
carbon source D-Sorbitol (C) N.D. N.D. -0.0 -2.5 N.D.
carbon source L-Asparagine (C) N.D. N.D. -2.0 -0.4 N.D.
carbon source L-tyrosine (C) N.D. N.D. -0.7 -1.6 N.D.
carbon source L-Threonine (C) N.D. N.D. -0.8 -1.5 N.D.
carbon source D-Arabinose (C) N.D. N.D. +0.2 -2.4 N.D.
carbon source L-Proline (C) N.D. N.D. -0.1 -2.2 N.D.
carbon source D-Arabinose (C) N.D. N.D. +0.0 -2.3 N.D.
carbon source Gly-Glu (C) N.D. N.D. -0.1 -2.0 N.D.
carbon source casaminos (C) N.D. N.D. -0.1 -2.1 N.D.
carbon source L-Asparagine (C) N.D. N.D. -1.8 -0.3 N.D.
carbon source L-Glutamic (C) N.D. N.D. -0.2 -1.9 N.D.
carbon source L-Threonine (C) N.D. N.D. -0.8 -1.2 N.D.
carbon source Glycolic Acid (C) N.D. N.D. -0.2 -1.9 N.D.
carbon source D-Mannose (C) N.D. N.D. +0.1 -2.1 N.D.
carbon source D-Gluconic Acid (C) N.D. N.D. -0.0 -2.0 N.D.
carbon source Glycolic Acid (C) N.D. N.D. +0.1 -1.9 N.D.
r2a outgrowth control R2A outgrowth control N.D. N.D. +0.3 -2.0 N.D.
r2a outgrowth control R2A outgrowth control N.D. N.D. +0.5 -1.5 N.D.
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