Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS16730 and ABID97_RS16735 overlap by 1 nucleotidesABID97_RS16735 and ABID97_RS16740 are separated by 34 nucleotidesABID97_RS16740 and ABID97_RS16745 are separated by 106 nucleotidesABID97_RS16745 and ABID97_RS16750 are separated by 2 nucleotides ABID97_RS16730: ABID97_RS16730 - oxygen-dependent coproporphyrinogen oxidase, at 3,461,443 to 3,462,360 _RS16730 ABID97_RS16735: ABID97_RS16735 - phosphoribosylamine--glycine ligase, at 3,462,360 to 3,463,658 _RS16735 ABID97_RS16740: ABID97_RS16740 - YebC/PmpR family DNA-binding transcriptional regulator, at 3,463,693 to 3,464,418 _RS16740 ABID97_RS16745: ABID97_RS16745 - class I SAM-dependent methyltransferase, at 3,464,525 to 3,465,313 _RS16745 ABID97_RS16750: ABID97_RS16750 - Rid family hydrolase, at 3,465,316 to 3,466,353 _RS16750
Group Condition ABID97_RS16730 ABID97_RS16735 ABID97_RS16740 ABID97_RS16745 ABID97_RS16750
carbon source L-Lactate (C) N.D. N.D. -0.1 -1.2 -2.2
carbon source D-Gluconic Acid (C) N.D. N.D. -0.7 -1.1 -1.7
carbon source Gly-Glu (C) N.D. N.D. +0.0 -1.2 -2.0
carbon source D-Gluconic Acid (C) N.D. N.D. -0.6 -1.1 -1.5
carbon source L-Lactate (C) N.D. N.D. +0.2 -1.2 -2.1
carbon source D-Lactate (C) N.D. N.D. -0.6 -0.8 -1.4
carbon source L-Malic (C) N.D. N.D. -0.9 -0.7 -1.0
carbon source D-Glucuronic Acid (C) N.D. N.D. +0.0 -1.0 -1.5
carbon source D-Sorbitol (C) N.D. N.D. -1.0 -0.4 -0.9
carbon source D-Sorbitol (C) N.D. N.D. -1.1 -0.2 -0.8
carbon source succinate (C) N.D. N.D. -0.6 -0.7 -0.9
carbon source Fumarate (C) N.D. N.D. -0.8 -0.5 -0.8
carbon source succinate (C) N.D. N.D. -0.3 -0.6 -1.2
carbon source Gly-Glu (C) N.D. N.D. +0.4 -1.0 -1.3
carbon source L-Histidine (C) N.D. N.D. -2.0 +0.2 -0.0
carbon source D,L-Lactate (C) N.D. N.D. +0.0 -0.4 -1.4
carbon source L-Malic (C) N.D. N.D. -0.6 -0.4 -0.7
carbon source D,L-Lactate (C) N.D. N.D. -0.0 -0.6 -1.1
carbon source D-Glucose (C) N.D. N.D. +0.6 -0.8 -1.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -1.4 +0.3 +0.1
carbon source butyrate (C) N.D. N.D. +0.7 -0.3 -0.6
carbon source L-Leucine (C) N.D. N.D. +0.8 -0.2 -0.6
carbon source L-Leucine (C) N.D. N.D. +1.1 -0.2 -0.6
carbon source butyrate (C) N.D. N.D. +1.1 -0.4 -0.4
carbon source D-Arabinose (C) N.D. N.D. +1.3 -0.2 -0.3
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. -0.4 +0.6 +0.7
carbon source D-Arabinose (C) N.D. N.D. +1.6 -0.3 -0.2
carbon source Tween 20 (C) N.D. N.D. +0.2 +0.6 +0.9
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. -0.2 +1.0 +1.0
phage V2_100 N.D. N.D. +3.4 -0.3 -0.4
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