Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS16725 and ABID97_RS16730 overlap by 4 nucleotidesABID97_RS16730 and ABID97_RS16735 overlap by 1 nucleotidesABID97_RS16735 and ABID97_RS16740 are separated by 34 nucleotidesABID97_RS16740 and ABID97_RS16745 are separated by 106 nucleotides ABID97_RS16725: ABID97_RS16725 - nicotinate (nicotinamide) nucleotide adenylyltransferase, at 3,460,817 to 3,461,446 _RS16725 ABID97_RS16730: ABID97_RS16730 - oxygen-dependent coproporphyrinogen oxidase, at 3,461,443 to 3,462,360 _RS16730 ABID97_RS16735: ABID97_RS16735 - phosphoribosylamine--glycine ligase, at 3,462,360 to 3,463,658 _RS16735 ABID97_RS16740: ABID97_RS16740 - YebC/PmpR family DNA-binding transcriptional regulator, at 3,463,693 to 3,464,418 _RS16740 ABID97_RS16745: ABID97_RS16745 - class I SAM-dependent methyltransferase, at 3,464,525 to 3,465,313 _RS16745
Group Condition ABID97_RS16725 ABID97_RS16730 ABID97_RS16735 ABID97_RS16740 ABID97_RS16745
carbon source L-Histidine (C) N.D. N.D. N.D. -2.0 +0.2
carbon source D-Gluconic Acid (C) N.D. N.D. N.D. -0.7 -1.1
carbon source D-Gluconic Acid (C) N.D. N.D. N.D. -0.6 -1.1
carbon source L-Malic (C) N.D. N.D. N.D. -0.9 -0.7
carbon source D-Lactate (C) N.D. N.D. N.D. -0.6 -0.8
carbon source L-Lactate (C) N.D. N.D. N.D. -0.1 -1.2
carbon source D-Sorbitol (C) N.D. N.D. N.D. -1.0 -0.4
carbon source D-Sorbitol (C) N.D. N.D. N.D. -1.1 -0.2
carbon source Fumarate (C) N.D. N.D. N.D. -0.8 -0.5
control NP N.D. N.D. N.D. -1.2 -0.1
carbon source succinate (C) N.D. N.D. N.D. -0.6 -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. -1.4 +0.3
carbon source Gly-Glu (C) N.D. N.D. N.D. +0.0 -1.2
carbon source L-Phenylalanine (C) N.D. N.D. N.D. -0.9 -0.1
carbon source L-Malic (C) N.D. N.D. N.D. -0.6 -0.4
carbon source D-Fructose (C) N.D. N.D. N.D. -1.1 +0.1
carbon source L-Lactate (C) N.D. N.D. N.D. +0.2 -1.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. -0.9 +0.2
carbon source Gly-Glu (C) N.D. N.D. N.D. +0.4 -1.0
carbon source L-Histidine (C) N.D. N.D. N.D. -0.9 +0.4
carbon source D-Glucose (C) N.D. N.D. N.D. +0.6 -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. -0.7 +0.5
carbon source butyrate (C) N.D. N.D. N.D. +0.7 -0.3
carbon source L-Leucine (C) N.D. N.D. N.D. +0.8 -0.2
carbon source butyrate (C) N.D. N.D. N.D. +1.1 -0.4
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. N.D. -0.2 +1.0
carbon source L-Leucine (C) N.D. N.D. N.D. +1.1 -0.2
carbon source D-Arabinose (C) N.D. N.D. N.D. +1.3 -0.2
carbon source D-Arabinose (C) N.D. N.D. N.D. +1.6 -0.3
phage V2_100 N.D. N.D. N.D. +3.4 -0.3
remove
ABID97_RS16725
plot		 remove
ABID97_RS16730
plot		 remove
ABID97_RS16735		 remove
ABID97_RS16740
plot		 remove
ABID97_RS16745
plot