Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS16565 and ABID97_RS16570 are separated by 134 nucleotidesABID97_RS16570 and ABID97_RS16575 overlap by 1 nucleotidesABID97_RS16575 and ABID97_RS16580 overlap by 4 nucleotidesABID97_RS16580 and ABID97_RS16585 are separated by 21 nucleotides ABID97_RS16565: ABID97_RS16565 - branched-chain amino acid ABC transporter substrate-binding protein, at 3,426,423 to 3,427,628 _RS16565 ABID97_RS16570: ABID97_RS16570 - hypothetical protein, at 3,427,763 to 3,428,179 _RS16570 ABID97_RS16575: ABID97_RS16575 - DNA polymerase III subunit chi, at 3,428,179 to 3,428,622 _RS16575 ABID97_RS16580: ABID97_RS16580 - leucyl aminopeptidase, at 3,428,619 to 3,430,148 _RS16580 ABID97_RS16585: ABID97_RS16585 - LPS export ABC transporter permease LptF, at 3,430,170 to 3,431,303 _RS16585
Group Condition ABID97_RS16565 ABID97_RS16570 ABID97_RS16575 ABID97_RS16580 ABID97_RS16585
carbon source L-Tryptophan (C) -6.6 N.D. N.D. -0.9 N.D.
carbon source L-Proline (C) -6.2 N.D. N.D. -0.6 N.D.
carbon source L-Proline (C) -5.5 N.D. N.D. -0.7 N.D.
carbon source L-Leucine (C) -5.3 N.D. N.D. -0.8 N.D.
carbon source L-Tryptophan (C) -5.3 N.D. N.D. -0.8 N.D.
carbon source L-Histidine (C) -4.0 N.D. N.D. -2.1 N.D.
carbon source L-Histidine (C) -3.3 N.D. N.D. -2.5 N.D.
carbon source L-Leucine (C) -5.1 N.D. N.D. -0.5 N.D.
carbon source L-Alanine (C) -4.4 N.D. N.D. -0.3 N.D.
carbon source L-Alanine (C) -4.5 N.D. N.D. -0.1 N.D.
carbon source L-Phenylalanine (C) -3.5 N.D. N.D. -0.6 N.D.
carbon source casaminos (C) -2.2 N.D. N.D. -0.5 N.D.
carbon source casaminos (C) -2.4 N.D. N.D. -0.2 N.D.
carbon source D-Gluconic Acid (C) -1.4 N.D. N.D. -1.2 N.D.
carbon source L-Phenylalanine (C) -2.7 N.D. N.D. +0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.0 N.D. N.D. -1.4 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.8 N.D. N.D. -1.5 N.D.
carbon source Glycolic Acid (C) -0.6 N.D. N.D. -1.7 N.D.
carbon source butyrate (C) -1.2 N.D. N.D. -1.0 N.D.
carbon source Tween 20 (C) -1.4 N.D. N.D. -0.7 N.D.
carbon source Tween 20 (C) -1.3 N.D. N.D. -0.7 N.D.
carbon source Glycolic Acid (C) -1.0 N.D. N.D. -1.0 N.D.
carbon source Fumarate (C) -0.7 N.D. N.D. -1.3 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.7 N.D. N.D. -1.3 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.1 N.D. N.D. -1.8 N.D.
carbon source L-Fucose (C) -0.8 N.D. N.D. -1.2 N.D.
r2a outgrowth control R2A outgrowth control -1.4 N.D. N.D. -0.5 N.D.
carbon source L-Glutamine (C) -0.6 N.D. N.D. -1.3 N.D.
carbon source L-Threonine (C) -1.9 N.D. N.D. +0.1 N.D.
carbon source D-Xylose (C) +0.7 N.D. N.D. -1.5 N.D.
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