Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS16560 and ABID97_RS16565 are separated by 88 nucleotidesABID97_RS16565 and ABID97_RS16570 are separated by 134 nucleotidesABID97_RS16570 and ABID97_RS16575 overlap by 1 nucleotidesABID97_RS16575 and ABID97_RS16580 overlap by 4 nucleotides ABID97_RS16560: ABID97_RS16560 - response regulator, at 3,425,942 to 3,426,334 _RS16560 ABID97_RS16565: ABID97_RS16565 - branched-chain amino acid ABC transporter substrate-binding protein, at 3,426,423 to 3,427,628 _RS16565 ABID97_RS16570: ABID97_RS16570 - hypothetical protein, at 3,427,763 to 3,428,179 _RS16570 ABID97_RS16575: ABID97_RS16575 - DNA polymerase III subunit chi, at 3,428,179 to 3,428,622 _RS16575 ABID97_RS16580: ABID97_RS16580 - leucyl aminopeptidase, at 3,428,619 to 3,430,148 _RS16580
Group Condition ABID97_RS16560 ABID97_RS16565 ABID97_RS16570 ABID97_RS16575 ABID97_RS16580
carbon source L-Tryptophan (C) -0.6 -6.6 N.D. N.D. -0.9
carbon source L-Histidine (C) -1.8 -4.0 N.D. N.D. -2.1
carbon source L-Proline (C) -0.8 -6.2 N.D. N.D. -0.6
carbon source L-Histidine (C) -1.4 -3.3 N.D. N.D. -2.5
carbon source L-Leucine (C) -0.7 -5.3 N.D. N.D. -0.8
carbon source L-Proline (C) -0.5 -5.5 N.D. N.D. -0.7
carbon source L-Tryptophan (C) -0.4 -5.3 N.D. N.D. -0.8
carbon source L-Leucine (C) -0.5 -5.1 N.D. N.D. -0.5
carbon source L-Alanine (C) -0.8 -4.5 N.D. N.D. -0.1
carbon source L-Alanine (C) -0.7 -4.4 N.D. N.D. -0.3
carbon source L-Phenylalanine (C) -1.2 -3.5 N.D. N.D. -0.6
carbon source L-Phenylalanine (C) -1.4 -2.7 N.D. N.D. +0.2
carbon source D-Gluconic Acid (C) -1.2 -1.4 N.D. N.D. -1.2
carbon source butyrate (C) -1.5 -1.2 N.D. N.D. -1.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.1 -1.0 N.D. N.D. -1.4
carbon source Tween 20 (C) -1.5 -1.4 N.D. N.D. -0.7
carbon source Gly-Glu (C) -1.9 -0.8 N.D. N.D. -0.8
carbon source D-Gluconic Acid (C) -1.8 -1.0 N.D. N.D. -0.5
carbon source Tween 20 (C) -1.2 -1.3 N.D. N.D. -0.7
carbon source 4-Hydroxybenzoic Acid (C) -0.9 -0.8 N.D. N.D. -1.5
carbon source Glycolic Acid (C) -0.9 -0.6 N.D. N.D. -1.7
carbon source casaminos (C) -0.5 -2.4 N.D. N.D. -0.2
carbon source casaminos (C) -0.3 -2.2 N.D. N.D. -0.5
carbon source Glycolic Acid (C) -1.0 -1.0 N.D. N.D. -1.0
carbon source Gly-Glu (C) -1.5 -0.7 N.D. N.D. -0.6
carbon source L-Fucose (C) -0.6 -0.8 N.D. N.D. -1.2
carbon source Fumarate (C) -0.5 -0.7 N.D. N.D. -1.3
carbon source butyrate (C) -0.8 -1.2 N.D. N.D. -0.5
carbon source 4-Hydroxybenzoic Acid (C) -0.5 -0.1 N.D. N.D. -1.8
carbon source D-Xylose (C) -0.5 +0.7 N.D. N.D. -1.5
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