Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS16490 and ABID97_RS16495 are separated by 16 nucleotidesABID97_RS16495 and ABID97_RS16500 are separated by 189 nucleotidesABID97_RS16500 and ABID97_RS16505 are separated by 18 nucleotidesABID97_RS16505 and ABID97_RS16510 are separated by 5 nucleotides ABID97_RS16490: ABID97_RS16490 - transcription termination factor NusA, at 3,410,550 to 3,412,034 _RS16490 ABID97_RS16495: ABID97_RS16495 - ribosome maturation factor RimP, at 3,412,051 to 3,412,698 _RS16495 ABID97_RS16500: ABID97_RS16500 - YbfB/YjiJ family MFS transporter, at 3,412,888 to 3,414,087 _RS16500 ABID97_RS16505: ABID97_RS16505 - dipeptide ABC transporter ATP-binding protein, at 3,414,106 to 3,415,734 _RS16505 ABID97_RS16510: ABID97_RS16510 - ABC transporter permease, at 3,415,740 to 3,416,783 _RS16510
Group Condition ABID97_RS16490 ABID97_RS16495 ABID97_RS16500 ABID97_RS16505 ABID97_RS16510
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. +0.1 -3.4 -2.3
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. -0.2 -1.9 -2.1
plant outgrowth control Plant outgrowth control N.D. N.D. +0.0 -2.2 -1.8
plant outgrowth control Plant outgrowth control N.D. N.D. +0.3 -2.2 -1.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.1 -2.6 -0.7
carbon source D-Glucose (C) N.D. N.D. -0.1 +1.5 +1.4
r2a outgrowth control R2A outgrowth control N.D. N.D. +0.0 +1.6 +1.2
carbon source Gly-Glu (C) N.D. N.D. +0.3 +1.3 +1.3
carbon source D-Glucose (C) N.D. N.D. -0.1 +1.7 +1.3
carbon source L-Phenylalanine (C) N.D. N.D. -0.0 +1.5 +1.5
carbon source L-Alanine (C) N.D. N.D. +0.1 +1.5 +1.4
carbon source Adenine (C) N.D. N.D. +0.2 +1.4 +1.4
carbon source L-tyrosine (C) N.D. N.D. +0.2 +1.5 +1.3
carbon source L-Threonine (C) N.D. N.D. -0.0 +1.6 +1.5
carbon source D-Serine (C) N.D. N.D. -0.0 +1.7 +1.5
carbon source L-Phenylalanine (C) N.D. N.D. +0.2 +1.6 +1.4
carbon source Glucuronamide (C) N.D. N.D. +0.2 +1.6 +1.4
carbon source D-Serine (C) N.D. N.D. +0.1 +1.7 +1.5
carbon source L-Alanine (C) N.D. N.D. +0.2 +1.6 +1.5
carbon source butyrate (C) N.D. N.D. +0.3 +1.7 +1.4
carbon source L-Tryptophan (C) N.D. N.D. -0.1 +1.9 +1.6
carbon source Adenine (C) N.D. N.D. +0.1 +1.8 +1.5
carbon source a-Ketoglutaric (C) N.D. N.D. -0.0 +1.8 +1.7
carbon source L-Tryptophan (C) N.D. N.D. +0.1 +1.8 +1.7
carbon source a-Ketoglutaric (C) N.D. N.D. +0.2 +1.9 +1.8
phage V2_100 N.D. N.D. -0.5 +2.3 +2.3
carbon source D,L-Malic Acid (C) N.D. N.D. +0.1 +2.1 +2.0
carbon source L-Histidine (C) N.D. N.D. -0.2 +2.3 +2.4
carbon source Glucuronamide (C) N.D. N.D. +0.1 +2.4 +2.1
carbon source L-Histidine (C) N.D. N.D. -0.1 +2.4 +2.4
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ABID97_RS16490
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ABID97_RS16495
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ABID97_RS16510
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