Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS16470 and ABID97_RS16475 overlap by 4 nucleotidesABID97_RS16475 and ABID97_RS16480 are separated by 2 nucleotidesABID97_RS16480 and ABID97_RS16485 are separated by 21 nucleotidesABID97_RS16485 and ABID97_RS16490 are separated by 24 nucleotides ABID97_RS16470: ABID97_RS16470 - translational GTPase TypA, at 3,404,378 to 3,406,213 _RS16470 ABID97_RS16475: ABID97_RS16475 - tRNA pseudouridine(55) synthase TruB, at 3,406,210 to 3,407,166 _RS16475 ABID97_RS16480: ABID97_RS16480 - 30S ribosome-binding factor RbfA, at 3,407,169 to 3,407,540 _RS16480 ABID97_RS16485: ABID97_RS16485 - translation initiation factor IF-2, at 3,407,562 to 3,410,525 _RS16485 ABID97_RS16490: ABID97_RS16490 - transcription termination factor NusA, at 3,410,550 to 3,412,034 _RS16490
Group Condition ABID97_RS16470 ABID97_RS16475 ABID97_RS16480 ABID97_RS16485 ABID97_RS16490
phage V1_1 -3.3 -0.2 N.D. N.D. N.D.
carbon source succinate (C) -2.7 -0.2 N.D. N.D. N.D.
carbon source D-Mannose (C) -3.1 +0.2 N.D. N.D. N.D.
carbon source Fumarate (C) -2.7 +0.0 N.D. N.D. N.D.
carbon source L-Arabinose (C) -2.6 -0.1 N.D. N.D. N.D.
carbon source D-Galactose (C) -2.7 +0.0 N.D. N.D. N.D.
phage V2_10 -2.0 -0.6 N.D. N.D. N.D.
carbon source L-Fucose (C) -3.0 +0.5 N.D. N.D. N.D.
carbon source D-Fructose (C) -2.1 -0.3 N.D. N.D. N.D.
phage V2_1 -2.2 -0.1 N.D. N.D. N.D.
carbon source L-Glutamine (C) -2.3 +0.0 N.D. N.D. N.D.
carbon source Gly-Glu (C) -2.0 -0.2 N.D. N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.2 +0.0 N.D. N.D. N.D.
phage V2_1 -1.8 -0.2 N.D. N.D. N.D.
carbon source Glycolic Acid (C) -1.6 -0.4 N.D. N.D. N.D.
control NP -1.9 -0.1 N.D. N.D. N.D.
carbon source Formate (C) -1.9 +0.1 N.D. N.D. N.D.
phage V1_1 -1.6 -0.3 N.D. N.D. N.D.
carbon source L-Phenylalanine (C) -1.4 -0.5 N.D. N.D. N.D.
carbon source L-Arabinose (C) -1.9 +0.1 N.D. N.D. N.D.
carbon source Glucuronamide (C) -1.9 +0.1 N.D. N.D. N.D.
carbon source acetate (C) -1.7 +0.1 N.D. N.D. N.D.
carbon source casaminos (C) -1.9 +0.4 N.D. N.D. N.D.
carbon source D-Serine (C) -1.8 +0.4 N.D. N.D. N.D.
carbon source Glycerol (C) -1.6 +0.4 N.D. N.D. N.D.
carbon source L-Histidine (C) -1.5 +0.6 N.D. N.D. N.D.
carbon source butyrate (C) -1.0 +0.9 N.D. N.D. N.D.
carbon source L-Threonine (C) -1.1 +1.2 N.D. N.D. N.D.
carbon source L-Threonine (C) -0.9 +1.2 N.D. N.D. N.D.
carbon source butyrate (C) +1.4 +0.9 N.D. N.D. N.D.
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ABID97_RS16470
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