Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS16395 and ABID97_RS16400 are separated by 30 nucleotidesABID97_RS16400 and ABID97_RS16405 are separated by 14 nucleotidesABID97_RS16405 and ABID97_RS16410 are separated by 11 nucleotidesABID97_RS16410 and ABID97_RS16415 are separated by 76 nucleotides ABID97_RS16395: ABID97_RS16395 - protocatechuate 3,4-dioxygenase, at 3,392,879 to 3,393,511 _RS16395 ABID97_RS16400: ABID97_RS16400 - glutamine-hydrolyzing GMP synthase, at 3,393,542 to 3,395,191 _RS16400 ABID97_RS16405: ABID97_RS16405 - type II toxin-antitoxin system VapC family toxin, at 3,395,206 to 3,395,625 _RS16405 ABID97_RS16410: ABID97_RS16410 - type II toxin-antitoxin system Phd/YefM family antitoxin, at 3,395,637 to 3,395,885 _RS16410 ABID97_RS16415: ABID97_RS16415 - IMP dehydrogenase, at 3,395,962 to 3,397,431 _RS16415
Group Condition ABID97_RS16395 ABID97_RS16400 ABID97_RS16405 ABID97_RS16410 ABID97_RS16415
carbon source L-Fucose (C) +0.2 N.D. -1.0 -0.3 N.D.
carbon source L-Glutamine (C) +0.1 N.D. -0.9 -0.1 N.D.
carbon source propionate (C) -0.1 N.D. -0.7 +0.1 N.D.
carbon source D-Glucose (C) -0.4 N.D. -0.4 +0.1 N.D.
carbon source D-Fructose (C) +0.2 N.D. -0.2 -0.4 N.D.
carbon source D-Arabinose (C) +0.2 N.D. -0.4 -0.2 N.D.
carbon source L-Threonine (C) -0.0 N.D. -0.6 +0.3 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 N.D. -0.7 +0.2 N.D.
carbon source Ethanol (C) +0.1 N.D. -0.4 +0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 N.D. -0.2 -0.3 N.D.
carbon source propionate (C) -0.3 N.D. +0.4 -0.1 N.D.
carbon source L-Histidine (C) -0.1 N.D. -0.3 +0.4 N.D.
carbon source L-tyrosine (C) -0.2 N.D. +0.4 -0.1 N.D.
carbon source L-Malic (C) -0.0 N.D. -0.2 +0.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 N.D. -0.4 +0.4 N.D.
carbon source D-Mannose (C) +0.1 N.D. -0.2 +0.3 N.D.
r2a outgrowth control R2A outgrowth control -0.2 N.D. +0.3 +0.2 N.D.
carbon source D-Glucuronic Acid (C) +0.2 N.D. -0.4 +0.5 N.D.
carbon source D-Ribose (C) +0.3 N.D. -0.3 +0.4 N.D.
carbon source D-Serine (C) +0.0 N.D. -0.1 +0.6 N.D.
carbon source D-Gluconic Acid (C) +0.2 N.D. -0.2 +0.5 N.D.
carbon source succinate (C) -0.1 N.D. +0.3 +0.4 N.D.
phage V1_10 -0.1 N.D. +0.2 +0.5 N.D.
carbon source Glucuronamide (C) +0.1 N.D. +0.3 +0.3 N.D.
carbon source D,L-Lactate (C) +0.2 N.D. +0.1 +0.4 N.D.
carbon source L-Glutamine (C) +0.1 N.D. +0.2 +0.4 N.D.
carbon source L-Leucine (C) +0.1 N.D. +0.1 +0.5 N.D.
carbon source L-tyrosine (C) +0.2 N.D. +0.3 +0.3 N.D.
carbon source butyrate (C) +0.2 N.D. +0.5 +0.2 N.D.
carbon source L-Fucose (C) +0.0 N.D. +0.6 +0.4 N.D.
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