Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS16225 and ABID97_RS16230 are separated by 65 nucleotidesABID97_RS16230 and ABID97_RS16235 overlap by 1 nucleotidesABID97_RS16235 and ABID97_RS16240 are separated by 105 nucleotidesABID97_RS16240 and ABID97_RS16245 are separated by 23 nucleotides ABID97_RS16225: ABID97_RS16225 - cytochrome-c oxidase, cbb3-type subunit I, at 3,357,877 to 3,359,316 _RS16225 ABID97_RS16230: ABID97_RS16230 - cbb3-type cytochrome oxidase assembly protein CcoS, at 3,359,382 to 3,359,519 _RS16230 ABID97_RS16235: ABID97_RS16235 - cation-translocating P-type ATPase, at 3,359,519 to 3,361,840 _RS16235 ABID97_RS16240: ABID97_RS16240 - universal stress protein, at 3,361,946 to 3,362,389 _RS16240 ABID97_RS16245: ABID97_RS16245 - AraC family transcriptional regulator, at 3,362,413 to 3,363,405 _RS16245
Group Condition ABID97_RS16225 ABID97_RS16230 ABID97_RS16235 ABID97_RS16240 ABID97_RS16245
phage V2_100 +0.2 N.D. -0.5 N.D. -0.6
control NP -0.2 N.D. -0.2 N.D. -0.2
carbon source L-Histidine (C) -0.4 N.D. -0.1 N.D. +0.1
carbon source D-Mannose (C) -0.2 N.D. -0.3 N.D. +0.1
carbon source propionate (C) -0.2 N.D. -0.2 N.D. +0.0
carbon source L-Lactate (C) +0.2 N.D. -0.1 N.D. -0.4
carbon source D,L-Malic Acid (C) -0.1 N.D. -0.2 N.D. +0.1
carbon source L-Arabinose (C) -0.1 N.D. +0.1 N.D. -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 N.D. -0.3 N.D. +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 N.D. -0.3 N.D. +0.0
phage V2_1 +0.2 N.D. -0.3 N.D. -0.0
carbon source Formate (C) -0.0 N.D. -0.2 N.D. +0.2
carbon source D-Mannose (C) -0.2 N.D. -0.0 N.D. +0.2
carbon source D-Arabinose (C) -0.2 N.D. +0.1 N.D. +0.1
carbon source D-Fructose (C) -0.2 N.D. +0.1 N.D. +0.2
carbon source 4-Hydroxybenzoic Acid (C) +0.1 N.D. -0.2 N.D. +0.2
carbon source butyrate (C) +0.1 N.D. +0.2 N.D. -0.2
carbon source L-Proline (C) +0.1 N.D. -0.2 N.D. +0.2
carbon source L-Histidine (C) -0.2 N.D. +0.3 N.D. +0.1
carbon source acetate (C) -0.2 N.D. +0.2 N.D. +0.2
r2a outgrowth control R2A outgrowth control +0.2 N.D. -0.1 N.D. +0.1
carbon source L-Fucose (C) -0.1 N.D. +0.1 N.D. +0.3
carbon source propionate (C) -0.0 N.D. +0.3 N.D. +0.1
carbon source D-Ribose (C) -0.0 N.D. +0.1 N.D. +0.3
carbon source L-Arabinose (C) +0.1 N.D. -0.0 N.D. +0.3
carbon source L-Phenylalanine (C) +0.1 N.D. +0.3 N.D. +0.0
carbon source L-Alanine (C) -0.1 N.D. +0.2 N.D. +0.4
carbon source L-Tryptophan (C) +0.2 N.D. +0.1 N.D. +0.1
carbon source D-Galactose (C) +0.1 N.D. +0.1 N.D. +0.3
carbon source Glucuronamide (C) +0.1 N.D. +0.4 N.D. +0.1
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ABID97_RS16225
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ABID97_RS16230
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ABID97_RS16240
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ABID97_RS16245
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