Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS16160 and ABID97_RS16165 are separated by 245 nucleotidesABID97_RS16165 and ABID97_RS16170 overlap by 4 nucleotidesABID97_RS16170 and ABID97_RS16175 are separated by 103 nucleotidesABID97_RS16175 and ABID97_RS16180 are separated by 7 nucleotides ABID97_RS16160: ABID97_RS16160 - fatty acid desaturase, at 3,344,969 to 3,346,153 _RS16160 ABID97_RS16165: ABID97_RS16165 - BON domain-containing protein, at 3,346,399 to 3,346,662 _RS16165 ABID97_RS16170: ABID97_RS16170 - phosphoketolase family protein, at 3,346,659 to 3,349,016 _RS16170 ABID97_RS16175: ABID97_RS16175 - response regulator transcription factor, at 3,349,120 to 3,349,860 _RS16175 ABID97_RS16180: ABID97_RS16180 - PAS domain S-box protein, at 3,349,868 to 3,351,961 _RS16180
Group Condition ABID97_RS16160 ABID97_RS16165 ABID97_RS16170 ABID97_RS16175 ABID97_RS16180
carbon source L-tyrosine (C) -0.4 N.D. +0.4 -4.0 -0.2
carbon source Glucuronamide (C) -0.2 N.D. -0.1 -3.1 -0.5
carbon source D,L-Malic Acid (C) +0.0 N.D. +0.4 -4.1 +0.3
phage V1_10 +0.1 N.D. -0.2 -1.7 -0.3
carbon source L-Arabinose (C) -0.2 N.D. -0.3 -1.5 -0.2
carbon source butyrate (C) -0.2 N.D. +0.2 -1.7 -0.0
carbon source L-Asparagine (C) +0.3 N.D. +0.1 -1.4 -0.5
carbon source acetate (C) -0.0 N.D. -0.0 -1.2 -0.0
carbon source 2-Deoxy-D-Ribose (C) -0.2 N.D. +0.2 -1.1 -0.2
carbon source propionate (C) -0.3 N.D. +0.1 -1.0 +0.1
carbon source D-Arabinose (C) +0.1 N.D. +0.3 -1.2 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 N.D. -0.2 +0.2 -0.8
carbon source L-Proline (C) +0.3 N.D. +0.2 -1.1 +0.0
carbon source Formate (C) -0.1 N.D. +0.5 -1.0 +0.3
phage V2_10 -0.5 N.D. +0.0 +0.8 -0.4
carbon source L-Threonine (C) -0.9 N.D. +0.3 +0.8 -0.1
carbon source Glycerol (C) -0.6 N.D. -0.1 +0.7 +0.1
carbon source L-Histidine (C) -0.4 N.D. +0.4 +0.6 -0.5
carbon source Ethanol (C) -0.4 N.D. +0.2 +0.5 -0.2
carbon source L-Histidine (C) -0.2 N.D. +0.1 +0.8 -0.4
carbon source D-Ribose (C) -0.3 N.D. +0.3 +0.7 -0.4
carbon source D-Galactose (C) -0.2 N.D. +0.1 +0.8 -0.4
carbon source L-Alanine (C) +0.1 N.D. -0.1 +1.0 -0.2
carbon source D-Sorbitol (C) -0.1 N.D. -0.3 +1.0 +0.2
phage V2_10 -0.4 N.D. -0.1 +1.4 -0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.0 N.D. +0.3 +0.9 -0.2
carbon source L-Alanine (C) +0.1 N.D. +0.1 +1.3 -0.3
carbon source Gly-Glu (C) +0.2 N.D. +0.1 +1.0 -0.1
carbon source Glycerol (C) -0.2 N.D. +0.2 +1.3 +0.1
phage V2_100 +0.7 N.D. +0.1 +2.4 -0.3
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ABID97_RS16160
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ABID97_RS16180
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