Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS16075 and ABID97_RS16080 overlap by 4 nucleotidesABID97_RS16080 and ABID97_RS16085 are separated by 132 nucleotidesABID97_RS16085 and ABID97_RS16090 are separated by 38 nucleotidesABID97_RS16090 and ABID97_RS16095 are separated by 178 nucleotides ABID97_RS16075: ABID97_RS16075 - ABC transporter substrate-binding protein, at 3,329,974 to 3,331,131 _RS16075 ABID97_RS16080: ABID97_RS16080 - AraC family transcriptional regulator, at 3,331,128 to 3,332,138 _RS16080 ABID97_RS16085: ABID97_RS16085 - L,D-transpeptidase, at 3,332,271 to 3,332,909 _RS16085 ABID97_RS16090: ABID97_RS16090 - proteophosphoglycan ppg4, at 3,332,948 to 3,333,244 _RS16090 ABID97_RS16095: ABID97_RS16095 - hypothetical protein, at 3,333,423 to 3,333,662 _RS16095
Group Condition ABID97_RS16075 ABID97_RS16080 ABID97_RS16085 ABID97_RS16090 ABID97_RS16095
phage V2_10 +0.0 -0.5 -0.5 N.D. N.D.
carbon source L-Leucine (C) -0.0 -0.0 -0.7 N.D. N.D.
carbon source D-Sorbitol (C) +0.1 +0.2 -0.9 N.D. N.D.
carbon source butyrate (C) +0.3 -0.4 -0.5 N.D. N.D.
carbon source D-Serine (C) +0.1 +0.1 -0.7 N.D. N.D.
carbon source D-Gluconic Acid (C) -0.2 +0.3 -0.6 N.D. N.D.
carbon source acetate (C) +0.2 +0.2 -0.6 N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.4 -0.2 +0.4 N.D. N.D.
carbon source L-Tryptophan (C) -0.1 -0.4 +0.4 N.D. N.D.
phage V2_100 -0.4 -0.1 +0.4 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.4 -0.6 N.D. N.D.
carbon source L-Histidine (C) -0.4 +0.1 +0.3 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.1 -0.3 +0.4 N.D. N.D.
carbon source D-Fructose (C) -0.1 -0.1 +0.5 N.D. N.D.
carbon source Fumarate (C) +0.2 -0.3 +0.5 N.D. N.D.
carbon source L-Asparagine (C) +0.0 -0.4 +0.8 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.1 -0.2 +0.9 N.D. N.D.
carbon source L-tyrosine (C) -0.3 +0.2 +0.7 N.D. N.D.
carbon source D,L-Malic Acid (C) -0.1 +0.5 +0.3 N.D. N.D.
carbon source L-Glutamic (C) -0.2 +0.0 +0.8 N.D. N.D.
carbon source Ethanol (C) -0.1 +0.1 +0.7 N.D. N.D.
carbon source D-Mannose (C) +0.3 -0.2 +0.8 N.D. N.D.
carbon source D-Glucuronic Acid (C) +0.1 +0.2 +0.5 N.D. N.D.
carbon source Gly-Glu (C) -0.0 +0.1 +0.8 N.D. N.D.
carbon source Glycolic Acid (C) +0.2 -0.1 +0.8 N.D. N.D.
carbon source L-Histidine (C) +0.1 +0.0 +0.8 N.D. N.D.
carbon source L-Glutamine (C) -0.0 +0.3 +0.8 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.0 +0.9 N.D. N.D.
carbon source L-Alanine (C) -0.0 +0.2 +1.0 N.D. N.D.
carbon source butyrate (C) -0.0 +0.2 +1.1 N.D. N.D.
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