Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS15945 and ABID97_RS15950 are separated by 88 nucleotidesABID97_RS15950 and ABID97_RS15955 are separated by 34 nucleotidesABID97_RS15955 and ABID97_RS15960 are separated by 128 nucleotidesABID97_RS15960 and ABID97_RS15965 overlap by 4 nucleotides ABID97_RS15945: ABID97_RS15945 - patatin-like phospholipase family protein, at 3,303,401 to 3,304,474 _RS15945 ABID97_RS15950: ABID97_RS15950 - tripartite tricarboxylate transporter substrate binding protein, at 3,304,563 to 3,305,546 _RS15950 ABID97_RS15955: ABID97_RS15955 - iron-containing alcohol dehydrogenase, at 3,305,581 to 3,306,717 _RS15955 ABID97_RS15960: ABID97_RS15960 - alpha/beta hydrolase, at 3,306,846 to 3,307,760 _RS15960 ABID97_RS15965: ABID97_RS15965 - YbgC/FadM family acyl-CoA thioesterase, at 3,307,757 to 3,308,638 _RS15965
Group Condition ABID97_RS15945 ABID97_RS15950 ABID97_RS15955 ABID97_RS15960 ABID97_RS15965
carbon source Adenine (C) -0.3 -0.2 -0.0 -0.3 -0.2
carbon source L-Asparagine (C) -0.4 +0.0 -0.3 -0.4 +0.1
carbon source D,L-Malic Acid (C) +0.0 -0.1 -0.1 -0.6 -0.2
carbon source D-Glucuronic Acid (C) -0.3 -0.2 +0.0 -0.3 -0.1
carbon source L-Arabinose (C) +0.0 -0.1 -1.1 +0.0 +0.3
carbon source D-Arabinose (C) +0.0 -0.1 -0.3 -0.4 +0.1
carbon source L-tyrosine (C) -0.1 -0.1 -0.4 +0.1 -0.1
carbon source D-Serine (C) -0.3 +0.1 -0.1 -0.4 +0.1
carbon source Ethanol (C) -0.2 +0.0 -0.6 +0.1 +0.1
carbon source L-tyrosine (C) +0.2 -0.1 -0.6 -0.1 +0.1
carbon source L-Fucose (C) -0.2 +0.2 -0.2 +0.1 -0.4
carbon source D-Gluconic Acid (C) -0.3 +0.1 -0.2 -0.0 +0.3
phage V1_1 +0.2 -0.1 -0.4 +0.4 -0.0
carbon source butyrate (C) +0.4 -0.1 -0.1 +0.0 -0.2
carbon source L-Glutamine (C) -0.2 +0.2 -0.1 -0.2 +0.2
phage V1_1 +0.2 -0.1 -0.2 +0.3 -0.0
carbon source L-Arabinose (C) +0.1 +0.0 -0.7 +0.3 +0.3
carbon source propionate (C) +0.2 +0.2 -0.3 +0.3 -0.1
carbon source Fumarate (C) +0.1 +0.1 -0.3 +0.3 +0.2
carbon source D-Mannose (C) -0.2 +0.4 -0.0 +0.1 +0.2
carbon source 2-Deoxy-D-Ribose (C) +0.2 +0.3 -0.2 +0.2 -0.1
carbon source casaminos (C) +0.2 +0.1 -0.2 +0.3 +0.1
carbon source butyrate (C) +0.4 -0.2 +0.0 +0.2 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 -0.6 -0.2 +0.3 +0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.1 -0.2 +0.4 +0.2
carbon source D-Glucose (C) -0.0 +0.3 +0.1 -0.1 +0.3
carbon source D-Serine (C) +0.1 +0.3 -0.1 +0.1 +0.2
carbon source D-Gluconic Acid (C) +0.0 +0.2 +0.1 +0.3 +0.2
phage V2_100 +0.4 +0.4 -0.1 +0.3 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.5 -0.1 +0.1 +0.2
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