Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS15890 and ABID97_RS15895 are separated by 48 nucleotidesABID97_RS15895 and ABID97_RS15900 are separated by 83 nucleotidesABID97_RS15900 and ABID97_RS15905 are separated by 16 nucleotidesABID97_RS15905 and ABID97_RS15910 overlap by 4 nucleotides ABID97_RS15890: ABID97_RS15890 - PqiC family protein, at 3,293,851 to 3,294,489 _RS15890 ABID97_RS15895: ABID97_RS15895 - MFS transporter, at 3,294,538 to 3,296,139 _RS15895 ABID97_RS15900: ABID97_RS15900 - VOC family protein, at 3,296,223 to 3,296,699 _RS15900 ABID97_RS15905: ABID97_RS15905 - MATE family efflux transporter, at 3,296,716 to 3,298,140 _RS15905 ABID97_RS15910: ABID97_RS15910 - DUF2239 family protein, at 3,298,137 to 3,298,712 _RS15910
Group Condition ABID97_RS15890 ABID97_RS15895 ABID97_RS15900 ABID97_RS15905 ABID97_RS15910
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -0.7 +0.0 -0.2 N.D.
carbon source Tween 20 (C) -0.5 -0.1 -0.4 -0.0 N.D.
plant outgrowth control Plant outgrowth control -0.3 -0.3 -0.2 -0.1 N.D.
carbon source Adenine (C) -0.3 -0.2 -0.4 +0.3 N.D.
carbon source Fumarate (C) -0.0 +0.2 -0.6 -0.0 N.D.
carbon source L-Malic (C) +0.2 +0.2 -0.6 -0.0 N.D.
carbon source L-Fucose (C) +0.2 +0.2 -0.2 -0.4 N.D.
carbon source D-Gluconic Acid (C) +0.1 +0.3 -0.3 -0.4 N.D.
carbon source L-Leucine (C) -0.1 +0.3 -0.3 +0.1 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.2 +0.3 -0.6 +0.5 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -0.1 +0.4 -0.0 N.D.
carbon source D-Serine (C) +0.1 +0.3 -0.4 +0.2 N.D.
carbon source D-Xylose (C) -0.1 +0.5 -0.2 -0.0 N.D.
carbon source D-Lactate (C) -0.2 +0.5 -0.1 +0.1 N.D.
plant outgrowth control Plant outgrowth control -0.0 +0.4 +0.1 -0.3 N.D.
carbon source D-Ribose (C) -0.3 +0.6 -0.3 +0.2 N.D.
carbon source L-Alanine (C) -0.1 +0.6 -0.2 -0.1 N.D.
carbon source L-tyrosine (C) -0.1 +0.6 -0.3 +0.1 N.D.
carbon source L-Proline (C) +0.2 +0.5 -0.3 -0.0 N.D.
carbon source Tween 20 (C) -0.2 +0.4 +0.2 +0.1 N.D.
carbon source Formate (C) -0.0 +0.5 -0.2 +0.2 N.D.
carbon source D,L-Lactate (C) -0.0 +0.7 +0.0 -0.1 N.D.
carbon source L-Histidine (C) -0.2 +0.3 -0.2 +0.9 N.D.
phage V2_100 +0.1 +0.6 +0.5 -0.3 N.D.
carbon source propionate (C) +0.0 +0.6 +0.3 -0.0 N.D.
carbon source L-Asparagine (C) +0.1 +0.6 -0.0 +0.1 N.D.
carbon source L-Lactate (C) +0.1 +0.4 +0.2 +0.3 N.D.
carbon source L-tyrosine (C) +0.0 +0.6 +0.1 +0.3 N.D.
carbon source propionate (C) +0.3 +0.8 -0.0 -0.1 N.D.
carbon source L-Histidine (C) -0.1 +0.2 +0.4 +1.0 N.D.
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ABID97_RS15890
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ABID97_RS15895
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