Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS15850 and ABID97_RS15855 are separated by 21 nucleotidesABID97_RS15855 and ABID97_RS15860 are separated by 18 nucleotidesABID97_RS15860 and ABID97_RS15865 are separated by 292 nucleotidesABID97_RS15865 and ABID97_RS15870 are separated by 320 nucleotides ABID97_RS15850: ABID97_RS15850 - FAD-linked oxidase C-terminal domain-containing protein, at 3,283,709 to 3,286,786 _RS15850 ABID97_RS15855: ABID97_RS15855 - methylated-DNA--[protein]-cysteine S-methyltransferase, at 3,286,808 to 3,287,365 _RS15855 ABID97_RS15860: ABID97_RS15860 - pyridoxamine 5'-phosphate oxidase family protein, at 3,287,384 to 3,287,998 _RS15860 ABID97_RS15865: ABID97_RS15865 - AP2/ERF family transcription factor, at 3,288,291 to 3,289,181 _RS15865 ABID97_RS15870: ABID97_RS15870 - MFS transporter, at 3,289,502 to 3,290,845 _RS15870
Group Condition ABID97_RS15850 ABID97_RS15855 ABID97_RS15860 ABID97_RS15865 ABID97_RS15870
carbon source L-Fucose (C) -0.3 -1.5 -0.1 +0.2 -0.1
carbon source D-Serine (C) -0.1 -1.5 -0.3 +0.1 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.9 +0.1 -1.0 +0.6
carbon source L-Glutamine (C) -0.2 -0.9 -0.2 +0.1 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -1.7 -0.0 +0.2 +0.6
carbon source D-Serine (C) -0.2 -1.0 -0.1 +0.2 +0.2
carbon source pyruvate (C) -0.0 -1.5 +0.0 +0.4 +0.4
carbon source butyrate (C) -0.0 -0.8 -0.4 +0.2 +0.3
carbon source propionate (C) -0.4 -0.7 -0.2 +0.3 +0.2
carbon source L-tyrosine (C) -0.1 -0.5 -0.3 +0.5 -0.2
carbon source D-Arabinose (C) +0.1 -1.0 -0.2 +0.1 +0.5
carbon source L-Histidine (C) +0.2 -1.2 -0.1 +0.2 +0.4
carbon source D,L-Malic Acid (C) +0.3 -0.9 -0.2 +0.0 +0.5
r2a outgrowth control R2A outgrowth control +0.2 -1.8 +0.4 +0.5 +0.3
carbon source D-Fructose (C) +0.1 -1.1 +0.0 +0.4 +0.4
carbon source L-Proline (C) +0.2 -0.8 +0.2 -0.1 +0.3
carbon source D-Sorbitol (C) +0.3 -0.8 +0.2 +0.0 +0.3
carbon source D,L-Lactate (C) -0.3 +0.4 -0.1 -0.1 +0.4
carbon source propionate (C) -0.5 +0.4 +0.1 +0.1 +0.2
phage V2_10 -0.4 +0.9 +0.1 -0.0 -0.0
carbon source casaminos (C) +0.1 -0.5 +0.2 +0.4 +0.4
carbon source D-Glucose (C) +0.3 -0.7 +0.5 +0.1 +0.3
carbon source L-Glutamic (C) +0.2 -0.4 +0.2 +0.2 +0.5
carbon source acetate (C) -0.1 +0.6 -0.1 +0.2 +0.3
carbon source D-Lactate (C) +0.3 -0.2 +0.4 +0.4 +0.2
carbon source Tween 20 (C) +0.0 +0.9 -0.1 +0.1 +0.3
carbon source D,L-Malic Acid (C) +0.2 +0.8 -0.1 +0.1 +0.3
phage V2_100 -0.1 +1.0 +0.1 -0.2 +0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -0.3 +0.8 +0.7 +0.5
carbon source Fumarate (C) +0.4 +0.2 +0.2 +0.4 +0.3
remove
ABID97_RS15850
plot		 remove
ABID97_RS15855
plot		 remove
ABID97_RS15860		 remove
ABID97_RS15865
plot		 remove
ABID97_RS15870
plot