Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS15790 and ABID97_RS15795 are separated by 100 nucleotidesABID97_RS15795 and ABID97_RS15800 are separated by 109 nucleotidesABID97_RS15800 and ABID97_RS15805 are separated by 171 nucleotidesABID97_RS15805 and ABID97_RS15810 are separated by 152 nucleotides ABID97_RS15790: ABID97_RS15790 - SDR family oxidoreductase, at 3,271,757 to 3,272,662 _RS15790 ABID97_RS15795: ABID97_RS15795 - LysR substrate-binding domain-containing protein, at 3,272,763 to 3,273,767 _RS15795 ABID97_RS15800: ABID97_RS15800 - NAD(P)H-dependent oxidoreductase, at 3,273,877 to 3,274,578 _RS15800 ABID97_RS15805: ABID97_RS15805 - hypothetical protein, at 3,274,750 to 3,275,562 _RS15805 ABID97_RS15810: ABID97_RS15810 - hypothetical protein, at 3,275,715 to 3,276,050 _RS15810
Group Condition ABID97_RS15790 ABID97_RS15795 ABID97_RS15800 ABID97_RS15805 ABID97_RS15810
carbon source D-Mannose (C) -0.0 N.D. -3.4 -0.2 N.D.
carbon source D-Mannose (C) -0.3 N.D. -2.3 +0.2 N.D.
carbon source L-tyrosine (C) -0.0 N.D. -1.1 -0.7 N.D.
carbon source propionate (C) +0.6 N.D. -2.1 -0.0 N.D.
carbon source Glucuronamide (C) -0.1 N.D. -1.4 -0.1 N.D.
phage V2_100 +0.3 N.D. -1.5 -0.1 N.D.
r2a outgrowth control R2A outgrowth control -0.2 N.D. -0.4 -0.6 N.D.
carbon source L-Fucose (C) -0.7 N.D. -0.7 +0.2 N.D.
carbon source L-tyrosine (C) +0.0 N.D. -0.8 -0.3 N.D.
carbon source casaminos (C) -0.2 N.D. -0.8 -0.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 N.D. -0.1 -0.3 N.D.
carbon source D-Xylose (C) +0.3 N.D. -0.5 -0.3 N.D.
carbon source Tween 20 (C) -0.3 N.D. +0.3 -0.4 N.D.
carbon source a-Ketoglutaric (C) -0.3 N.D. +0.3 -0.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 N.D. +0.2 -0.8 N.D.
carbon source Glycolic Acid (C) -0.4 N.D. +0.3 -0.3 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 N.D. +0.4 -0.3 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.3 N.D. +0.5 -0.4 N.D.
carbon source L-Leucine (C) -0.1 N.D. +0.6 -0.4 N.D.
carbon source L-Malic (C) -0.2 N.D. +0.7 -0.1 N.D.
phage V2_10 +0.4 N.D. +0.3 -0.4 N.D.
carbon source L-Asparagine (C) +0.1 N.D. +0.7 -0.4 N.D.
carbon source L-Alanine (C) +0.3 N.D. +0.5 -0.3 N.D.
carbon source L-Glutamic (C) -0.0 N.D. +0.9 -0.3 N.D.
carbon source D-Gluconic Acid (C) +0.4 N.D. +0.4 -0.3 N.D.
carbon source Glycerol (C) +0.3 N.D. +0.5 -0.2 N.D.
carbon source L-Malic (C) +0.4 N.D. +0.4 -0.2 N.D.
carbon source propionate (C) +0.8 N.D. +0.3 -0.5 N.D.
carbon source D,L-Lactate (C) +0.3 N.D. +0.5 -0.2 N.D.
carbon source D,L-Malic Acid (C) +0.3 N.D. +0.7 -0.2 N.D.
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