Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS15765 and ABID97_RS15770 are separated by 3 nucleotidesABID97_RS15770 and ABID97_RS15775 are separated by 19 nucleotidesABID97_RS15775 and ABID97_RS15780 are separated by 53 nucleotidesABID97_RS15780 and ABID97_RS15785 are separated by 35 nucleotides ABID97_RS15765: ABID97_RS15765 - SDR family oxidoreductase, at 3,266,678 to 3,267,472 _RS15765 ABID97_RS15770: ABID97_RS15770 - PaaI family thioesterase, at 3,267,476 to 3,267,937 _RS15770 ABID97_RS15775: ABID97_RS15775 - NADP-dependent oxidoreductase, at 3,267,957 to 3,268,973 _RS15775 ABID97_RS15780: ABID97_RS15780 - isovaleryl-CoA dehydrogenase, at 3,269,027 to 3,270,667 _RS15780 ABID97_RS15785: ABID97_RS15785 - glutathione S-transferase family protein, at 3,270,703 to 3,271,641 _RS15785
Group Condition ABID97_RS15765 ABID97_RS15770 ABID97_RS15775 ABID97_RS15780 ABID97_RS15785
carbon source casaminos (C) -0.1 N.D. -0.6 -0.0 -0.4
carbon source D-Gluconic Acid (C) -0.2 N.D. -0.4 -0.4 +0.1
carbon source L-Alanine (C) -0.2 N.D. -0.1 -0.2 -0.4
carbon source D-Xylose (C) -0.1 N.D. -0.6 -0.2 +0.0
carbon source Ethanol (C) -0.2 N.D. -0.5 -0.3 +0.2
carbon source Adenine (C) +0.2 N.D. -0.4 -0.0 -0.3
carbon source 2-Deoxy-D-Ribose (C) -0.3 N.D. +0.2 -0.3 -0.0
carbon source Glucuronamide (C) -0.3 N.D. -0.2 -0.1 +0.2
carbon source L-Alanine (C) -0.4 N.D. -0.4 +0.2 +0.3
r2a outgrowth control R2A outgrowth control +0.1 N.D. -0.4 -0.3 +0.3
carbon source acetate (C) -0.4 N.D. -0.0 +0.4 -0.2
carbon source D-Mannose (C) -0.1 N.D. -0.4 +0.5 +0.1
phage V1_1 +0.3 N.D. -0.3 +0.4 -0.2
carbon source Glucuronamide (C) +0.0 N.D. +0.3 +0.3 -0.3
carbon source propionate (C) +0.1 N.D. +0.5 -0.5 +0.3
carbon source L-tyrosine (C) +0.3 N.D. +0.6 -0.4 -0.0
carbon source casaminos (C) -0.1 N.D. +0.2 +0.5 -0.2
carbon source Glycerol (C) -0.2 N.D. +0.3 +0.3 +0.1
phage V2_10 -0.2 N.D. -0.3 +0.8 +0.1
carbon source L-Glutamine (C) -0.2 N.D. +0.1 +0.5 +0.1
carbon source L-Histidine (C) -0.1 N.D. +0.9 +0.1 -0.3
carbon source L-Proline (C) -0.2 N.D. -0.1 +0.5 +0.4
carbon source L-Tryptophan (C) -0.1 N.D. +0.3 +0.6 -0.1
carbon source D-Mannose (C) -0.2 N.D. +0.5 +0.6 -0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.2 N.D. +0.4 +0.3 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 N.D. +0.3 +0.3 +0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 N.D. -0.3 +1.0 +0.3
phage V2_10 +0.3 N.D. +0.3 +0.2 +0.2
carbon source Formate (C) +0.2 N.D. +0.1 +0.5 +0.2
phage V2_100 +0.2 N.D. +1.0 -0.0 +0.3
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