Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS15695 and ABID97_RS15700 overlap by 4 nucleotidesABID97_RS15700 and ABID97_RS15705 are separated by 168 nucleotidesABID97_RS15705 and ABID97_RS15710 are separated by 122 nucleotidesABID97_RS15710 and ABID97_RS15715 are separated by 198 nucleotides ABID97_RS15695: ABID97_RS15695 - peptide-methionine (R)-S-oxide reductase MsrB, at 3,248,803 to 3,249,213 _RS15695 ABID97_RS15700: ABID97_RS15700 - protein adenylyltransferase SelO, at 3,249,210 to 3,250,691 _RS15700 ABID97_RS15705: ABID97_RS15705 - 3-(methylthio)propionyl-CoA ligase, at 3,250,860 to 3,252,503 _RS15705 ABID97_RS15710: ABID97_RS15710 - branched-chain amino acid ABC transporter substrate-binding protein, at 3,252,626 to 3,253,855 _RS15710 ABID97_RS15715: ABID97_RS15715 - branched-chain amino acid ABC transporter substrate-binding protein, at 3,254,054 to 3,255,292 _RS15715
Group Condition ABID97_RS15695 ABID97_RS15700 ABID97_RS15705 ABID97_RS15710 ABID97_RS15715
carbon source 4-Hydroxybenzoic Acid (C) -1.2 -0.3 -0.2 +0.1 +0.3
carbon source Adenine (C) -1.3 -0.2 +0.1 +0.2 -0.1
carbon source D,L-Malic Acid (C) -0.4 -0.1 -0.3 -0.3 -0.1
carbon source Glycolic Acid (C) -0.5 -0.6 +0.4 -0.2 -0.2
carbon source D-Xylose (C) -0.8 -0.2 -0.1 -0.2 +0.2
carbon source D-Mannose (C) -1.2 -0.1 +0.1 +0.1 +0.0
carbon source Glucuronamide (C) -1.0 -0.0 +0.2 -0.0 -0.1
carbon source Formate (C) -0.6 -0.3 +0.1 -0.3 +0.1
carbon source a-Ketoglutaric (C) -0.4 -0.2 -0.1 -0.4 +0.1
r2a outgrowth control R2A outgrowth control -0.6 -0.0 +0.2 -0.3 -0.2
carbon source Glucuronamide (C) -0.9 +0.0 -0.1 +0.2 -0.1
carbon source Adenine (C) -1.1 -0.2 +0.0 +0.2 +0.2
carbon source D-Glucose (C) -0.6 -0.1 +0.1 -0.3 +0.1
carbon source L-Alanine (C) -0.7 -0.1 +0.2 -0.0 -0.1
carbon source D-Serine (C) -0.6 -0.2 +0.3 -0.0 -0.1
carbon source D-Mannose (C) -1.2 -0.0 +0.3 +0.3 +0.0
carbon source L-Malic (C) -0.6 -0.1 +0.2 +0.1 +0.1
carbon source L-Leucine (C) -0.6 -0.2 +0.3 -0.1 +0.2
carbon source L-Leucine (C) -0.6 -0.1 +0.4 -0.1 +0.2
carbon source Glycolic Acid (C) -0.5 -0.2 +0.4 +0.0 +0.0
carbon source butyrate (C) -1.1 +0.5 +0.0 +0.5 -0.1
carbon source 4-Hydroxybenzoic Acid (C) -0.7 +0.0 +0.2 +0.2 +0.2
carbon source butyrate (C) -0.7 +0.5 +0.1 +0.2 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -0.0 +0.1 +0.3 +0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 +0.3 +0.2 -0.1 +0.3
carbon source D-Glucose (C) -0.3 -0.0 +0.3 +0.2 +0.2
carbon source 2-Deoxy-D-Ribose (C) -0.6 -0.2 +1.2 +0.4 -0.4
carbon source D,L-Malic Acid (C) +0.1 -0.1 +0.4 -0.2 +0.4
carbon source 2-Deoxy-D-Ribose (C) -0.7 -0.1 +1.4 +0.6 -0.4
carbon source L-tyrosine (C) -0.6 -0.2 +1.3 +0.6 -0.1
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