Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS15320 and ABID97_RS15325 overlap by 4 nucleotidesABID97_RS15325 and ABID97_RS15330 are separated by 59 nucleotidesABID97_RS15330 and ABID97_RS15335 overlap by 47 nucleotidesABID97_RS15335 and ABID97_RS15340 are separated by 211 nucleotides ABID97_RS15320: ABID97_RS15320 - sulfur carrier protein ThiS, at 3,169,948 to 3,170,151 _RS15320 ABID97_RS15325: ABID97_RS15325 - FAD-dependent oxidoreductase, at 3,170,148 to 3,171,239 _RS15325 ABID97_RS15330: ABID97_RS15330 - bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase, at 3,171,299 to 3,172,159 _RS15330 ABID97_RS15335: ABID97_RS15335 - cytosine permease, at 3,172,113 to 3,173,453 _RS15335 ABID97_RS15340: ABID97_RS15340 - TetR/AcrR family transcriptional regulator C-terminal domain-containing protein, at 3,173,665 to 3,174,399 _RS15340
Group Condition ABID97_RS15320 ABID97_RS15325 ABID97_RS15330 ABID97_RS15335 ABID97_RS15340
carbon source L-Histidine (C) N.D. -0.1 N.D. -0.5 -0.9
phage V2_100 N.D. -0.6 N.D. -0.3 -0.5
carbon source L-Leucine (C) N.D. -0.4 N.D. -0.3 -0.4
carbon source Formate (C) N.D. -0.5 N.D. -0.2 -0.2
carbon source D-Serine (C) N.D. -0.7 N.D. -0.2 -0.0
carbon source L-Arabinose (C) N.D. -0.1 N.D. -0.1 -0.6
carbon source L-Phenylalanine (C) N.D. -0.4 N.D. +0.3 -0.7
carbon source Tween 20 (C) N.D. -0.3 N.D. -0.1 -0.4
carbon source propionate (C) N.D. -0.2 N.D. -0.1 -0.4
carbon source D-Fructose (C) N.D. -0.4 N.D. +0.0 -0.3
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.0 N.D. +0.1 -0.7
carbon source L-Glutamine (C) N.D. -0.4 N.D. +0.1 -0.3
carbon source Fumarate (C) N.D. +0.1 N.D. -0.3 -0.4
carbon source D-Ribose (C) N.D. -0.4 N.D. -0.3 +0.1
carbon source L-Histidine (C) N.D. -0.6 N.D. -0.2 +0.2
carbon source Glucuronamide (C) N.D. -0.3 N.D. +0.1 -0.4
carbon source L-Alanine (C) N.D. -0.1 N.D. +0.2 -0.6
carbon source Glycerol (C) N.D. +0.3 N.D. -0.2 -0.5
carbon source D-Gluconic Acid (C) N.D. -0.2 N.D. +0.2 -0.4
carbon source D-Arabinose (C) N.D. -0.1 N.D. +0.2 -0.4
carbon source L-Lactate (C) N.D. +0.4 N.D. -0.1 -0.6
carbon source D-Ribose (C) N.D. +0.4 N.D. -0.2 -0.4
carbon source L-Tryptophan (C) N.D. +0.4 N.D. +0.1 -0.6
carbon source D-Sorbitol (C) N.D. +0.2 N.D. +0.2 -0.4
carbon source D,L-Malic Acid (C) N.D. -0.7 N.D. +0.3 +0.4
carbon source L-Glutamic (C) N.D. +0.2 N.D. +0.2 -0.4
r2a outgrowth control R2A outgrowth control N.D. -0.3 N.D. +0.2 +0.4
phage V2_10 N.D. +0.7 N.D. -0.2 -0.1
carbon source D-Glucuronic Acid (C) N.D. +0.3 N.D. +0.4 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.1 N.D. +0.7 +0.4
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